KEGG   Rhodoferax lithotrophicus: MIZ03_3658
Entry
MIZ03_3658        CDS       T10289                                 
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rlh  Rhodoferax lithotrophicus
Pathway
rlh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rlh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MIZ03_3658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rlh03019]
    MIZ03_3658
   03009 Ribosome biogenesis [BR:rlh03009]
    MIZ03_3658
   03036 Chromosome and associated proteins [BR:rlh03036]
    MIZ03_3658
Enzymes [BR:rlh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MIZ03_3658
Messenger RNA biogenesis [BR:rlh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MIZ03_3658
Ribosome biogenesis [BR:rlh03009]
 Eukaryotic type
  90S particles
   RNase
    MIZ03_3658
 Prokaryotic type
  rRNA processing factors
   MIZ03_3658
Chromosome and associated proteins [BR:rlh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MIZ03_3658
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 RM44_endonuclase dsrm DUF3612 Lzipper-MIP1
Other DBs
NCBI-ProteinID: BCO28748
UniProt: A0ABM7MQU7
LinkDB
Position
complement(3745094..3745780)
AA seq 228 aa
MNQALTALQKRLQHQFTDSNLLTRALTHRSFSADHNERLEFLGDSVLGVVVADMLYRRLQ
SLPEGDLSRVRANLVKQDTLHQLSVSLGLPEVIRLGEGEMRSGGQKRPSILADVLEAVIG
AVYLDAGFAAAQALVQRLYQAVEINPAMDAIGKDPKTELQEWLQARRMKVPGYKVVATLG
AAHKQTFDVECEILELNLCERGIGGSRRAGEQAAAAAMLQTLKSRVNE
NT seq 687 nt   +upstreamnt  +downstreamnt
ttgaaccaggccttgactgcgctgcaaaagcgcttgcaacaccaatttacggattccaac
ctgctgacccgtgcgttgacgcatcgcagtttctctgccgatcacaacgagcgtctggag
tttctgggcgattcggtgctaggggtggtagtggctgacatgctttaccgccgcctgcaa
agtttgcccgaaggtgatttgtcccgcgtgcgtgccaacttggtcaagcaagacactttg
caccagttgtctgtgtcactgggtttgccagaagtgattcgcctgggcgaaggtgaaatg
cgctcaggcgggcaaaaacgcccctccatcctggccgatgtgctggaggcggtgatcggc
gcggtgtatcttgatgccggttttgctgccgcacaagccctggtgcagcgcttgtaccag
gcggtagaaatcaacccggccatggatgccatcggcaaagaccccaaaaccgagctgcaa
gagtggttgcaagcgcggcgcatgaaagtgcccggctacaaggtggtcgccacgctgggc
gctgcgcacaagcagacctttgatgtggagtgtgaaattcttgaactcaacttgtgcgag
cgcggtattggcggctctcgccgcgccggagagcaagctgccgccgcggccatgttgcaa
acacttaaatccagggtgaatgaatga

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