Rhodoferax lithotrophicus: MIZ03_3850
Help
Entry
MIZ03_3850 CDS
T10289
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
rlh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIZ03_3850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MIZ03_3850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BCO28940
LinkDB
All DBs
Position
3932229..3935366
Genome browser
AA seq
1045 aa
AA seq
DB search
MNSTPDNSTYLARALQQQTISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDT
LYAEGQRRYVESLSTYARQFLQLMDKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEI
HDYLRLLFARAGTPYCPEHQLPLQSQTVSQMVDAVLALPADTRLMILAPVAREKKGEFLE
LFAEMQAQGYVRFRVNGQTFEFDQLPALKKTEKHDIDVVIDRVKVRHAPELPTASEAADG
AASSTAVSGDRTDFDNLKQRLAESFEAALRVANGRAIALEIDSSSGTIDGHQRPKEHLFN
AKFACPVCNYSIAELEPRLFSFNSPVGACPSCDGLGATEFFDPTRVVAFPTLSLASGAIK
GWDRRNAYYFAMLESLAAHYKFDIEQPFESLPDQVRHAVLHGSGEEEIKFTYEMGSGASA
GKKVSKKHPFEGILPNMQRRYRETDSAVVREDLARLRSIQPCPDCAGSRLKLEARHVKVG
EGVQARAIFELSHYTLAECFAYFNSLHMQGAKGDIAAKVVREISLRLKFLNDVGLTYLSL
DRSAETLSGGESQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDIGNS
VLVVEHDEDMMRAADQIIDMGPGAGVHGGRITAQGSFEEVKASPESLTGQYLSGARCIAV
PSHRTAWLPTVAPKPFNEGKPSRSAPSPAAVRRAEREAKHIATLGELQALKVIGASGHNL
KNVDVAFPVGLFTCVTGVSGSGKSTLVNDTLYKAVARTLYRAHDEPSAHTAIEGIEYFDK
VINVDQSPIGRTPRSNPATYTGLFTPIRELMAEVPTARERGYGPGRFSFNVAGGRCEACE
GDGMVKVEMHFLPDVYVPCDVCTGKRYNRETLEVLYKGKNIAQILELTVEAAHEFFKAVP
TIERKLHTLLDVGLSYIRLGQAATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLH
FADIDLLLKVLHQLRDAGNTIVVIEHNLDVIKTADWLIDMGPEGGSGGGTVVGVGTPEDI
AANPASHTGHYLARLLGTPPASGVQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
ttgaactccactcctgacaacagcacctatctggcccgggcactgcagcagcaaaccatc
agcatccgcggagcgcgcacgcacaacctcaaaaacatcgacctggacattccgcgcaac
cagctggtggtgatcacgggcttaagcggctcaggcaaatccagcctggcgtttgacacc
ctgtatgccgaaggccagcgccgttatgtggaaagcctgtccacctacgcccgccagttt
ttgcaactgatggacaagcccgatgtagacatgatcgaaggcctgtcgcccgccatttcg
atcgagcaaaaagccaccagccacaacccgcgctccaccgtcggcacggtgaccgagatc
catgactacctgcgcttgctgtttgcccgcgctggcacgccctactgcccggaacaccag
ttgccgctgcaaagccagaccgtcagccagatggtggatgcggtgctggccctgcctgct
gacacccggctgatgattctggccccggtcgcgcgtgagaaaaaaggcgagtttctggag
ctgtttgccgagatgcaggcccagggctatgtgcgctttcgcgtcaacggccagaccttt
gagtttgaccaattgcccgcactcaagaaaaccgaaaagcacgacatcgacgtggtgatt
gaccgcgtgaaggtgcgccatgcgcccgaattgcccaccgcctcagaagcggccgacggc
gcagcatcttcaaccgctgtcagcggtgatcgtaccgactttgacaatctcaagcagcgc
ctggccgagagctttgaggccgccttacgggtagccaatggccgcgctatagccttagaa
atagatagcagctcaggcactattgacgggcatcagaggccaaaagagcacttatttaat
gccaaatttgcctgcccggtgtgtaattactcgattgccgagctggaaccccgcctgttt
tccttcaattcacccgtgggggcctgcccaagctgtgatggcctgggcgcaaccgaattt
tttgacccgacgcgggtagtcgccttccccacgctcagtctggccagcggggccatcaag
ggctgggatcggcgcaacgcctactactttgccatgctggagagcctggccgcacactac
aagtttgacattgagcagccttttgaatccttaccagaccaggtgcggcacgctgtgtta
cacggctcgggcgaagaagagatcaagttcacttacgagatgggttccggggcatcggcg
ggcaaaaaagtcagcaaaaaacacccgtttgagggcattctgcccaacatgcagcgccgt
taccgcgagaccgattccgccgtggtgcgcgaagacctggcccgcctgcgcagcatccag
ccctgcccggactgtgcgggcagccgcctgaagctggaggcacgccacgtcaaggtcggt
gaaggcgtgcaggcacgcgccatttttgagctcagccactacaccctggccgagtgtttt
gcctacttcaacagcttgcacatgcagggggccaagggcgacattgcggccaaggtggtg
cgcgaaatcagcctgcgcctcaaatttttgaacgacgtgggcctgacctacctcagcctg
gatcgcagtgccgaaaccctcagcggtggcgaaagccagcgcattcgcctggccagccag
attggcagcggcctgaccggcgtgatgtatgtgctggacgagcccagcatcggcctgcac
cagcgcgataacgaccgcctgatcggcaccctgaaacacctgcgcgacattggcaacagc
gtgctggtggtcgagcatgacgaagacatgatgcgcgctgccgaccagatcatcgacatg
ggccccggcgcgggtgtacacggcgggcgcatcacggcgcaaggcagtttcgaggaagtc
aaagccagcccggaatcgctgaccggccagtacctgagtggtgcgcgttgtattgccgta
cccagccaccgcaccgcctggctgcccacggtggcccccaagccctttaatgagggcaag
cccagccgctcagcgcccagcccggctgccgtgcgccgcgccgaacgcgaggccaagcac
atcgccacattgggtgagctgcaagcgctcaaggtgattggggccagcggccacaacctg
aaaaacgtggacgtggcctttccagtcggactgttcacctgcgtcaccggggtctcgggc
tcgggcaaatccaccctggtcaacgacacgctttacaaggccgtggcccgcaccctgtac
cgcgcccatgacgagccctcggcgcacacagccatcgaaggcattgaatactttgacaag
gtcatcaacgtcgaccagagcccgattggccgcacaccacgctccaacccggccacttac
accggcctgttcaccccaatccgtgagctgatggctgaagtgcccacggcgcgcgagcgc
ggctacggcccagggcgcttcagcttcaacgtggccggtggccgctgcgaggcctgcgag
ggcgacggcatggtcaaggtcgagatgcattttctacccgatgtctacgtgccctgcgac
gtgtgcaccggcaagcgctacaaccgcgaaacgctggaagtgctctacaagggcaaaaac
atcgcccagattctggaactcacggtcgaagccgcgcacgagtttttcaaagccgtgccc
accatcgagcgcaagctgcacaccctgctggacgtgggcctgagctacattcgcctgggg
caagccgccaccaccttatccggcggcgaggcacagcgcgtgaagctggcgctggaactc
tccaaacgcgacaccgggcgcacgctctacatccttgacgaacccaccaccggcctgcac
tttgccgacattgacctgctgctcaaagtgctgcaccagttgcgtgacgcgggcaacacc
attgtggtgattgaacacaacctggacgtgatcaaaaccgccgactggctgatcgacatg
gggccagaaggcggctctggcggcggcacggtggtgggcgttggcacgcccgaagacatt
gccgccaacccagccagccacaccgggcactatctggcgcggctgctgggcacaccacca
gccagtggtgtgcagtga
DBGET
integrated database retrieval system
