Rhodoferax lithotrophicus: MIZ03_3986
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Entry
MIZ03_3986 CDS
T10289
Name
(GenBank) regulatory protein AtoC
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MIZ03_3986
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rlh02022
]
MIZ03_3986
02035 Bacterial motility proteins [BR:
rlh02035
]
MIZ03_3986
Two-component system [BR:
rlh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
MIZ03_3986
Bacterial motility proteins [BR:
rlh02035
]
Pilus system
Twitching motility proteins
MIZ03_3986
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_SUN2
VpsR
AAA_16
PDE8A_N
AAA
HTH_VMAP-M9
AAA_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BCO29074
UniProt:
A0ABM7MRT5
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All DBs
Position
4097924..4099366
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AA seq
480 aa
AA seq
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MTSAITPAHILVVDDEPDLRTLYELTLLREGYRIDTAGDLQQARSLLMAHHYDVLITDMR
LPDGLGLTLICELKAEHRHEQCVVITAYGSAENAVEALKSGAFDYLTKPVDLKQFRQVIA
SAVRSQAATAVAVKPVIPNAGPGILGQRALARLIGQSPGMRQIKERIVKVATSMAPVLVT
GESGTGKELVAYAIHANSHRAKGPWVAVNCSAIPDALLEAEFFGSKKGAYTGSHVDREGF
FQAASGGTLFLDEIGDLPLPMQSKLLRAIQERRVRPLGSTQEDIIDARIVSATHKDLAQE
VQNGHFRQDLFYRLNVIDMTIPPLRERPEDLPDLCHALLARIAEESGAPVPAIQASDLEK
LGCLRLPGNVRELENLLHRAVALGNGESLQFDAFSTPVSDGLSAFPAQTSPMDHAVIPSD
LQQHLDDLERQILRRALQATGFNRTAAAAQLGLSLRQMRYRIARLHIDSAQQDDTDVAPV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgccatcaccccagcgcatattttggtcgtcgacgatgagcccgacctgcgc
accctgtatgaattaaccttgttgcgtgaaggctaccggatcgacacggcgggcgacttg
cagcaagccagatcgttgctgatggcgcatcactatgacgtattgatcaccgacatgcgt
ttgccagatggtcttggattaaccctgatttgtgaactcaaagccgagcatcgccatgaa
caatgtgtggtgattacggcctacgggtcggcagaaaatgccgtggaggcactcaaaagc
ggcgcttttgattacctcaccaaacccgttgatttgaaacaatttcgccaagtcattgct
tcagctgtgcgaagtcaagcggcaaccgccgtggctgttaaaccggtcatccccaacgcg
ggtcctggcattctggggcaacgcgcactggctcggctgattgggcagtcacccggaatg
cgacaaatcaaggagcgcatcgttaaagtggccaccagcatggcaccggtactggtcacc
ggcgaatcaggcacaggcaaggaattggtggcttatgcgattcatgccaacagccaccgc
gccaaagggccttgggtggctgtgaattgcagcgccattcccgatgcacttctggaagcc
gagttctttggctccaaaaaaggggcttacaccggatcacatgtcgaccgcgaagggttt
ttccaagccgccagtgggggtaccctgtttctggacgagatcggtgacctgccactgccc
atgcaatccaaactgctgcgggctattcaagagcgccgagtcaggcccctggggtccacc
caggaggacatcattgatgcccgcatcgtcagcgccacccacaaagatttggcccaagag
gtacaaaacgggcatttccggcaagacctgttctaccgactcaacgtgattgatatgacc
atcccgccgctgcgcgagcgcccggaagatttgcccgacctgtgccatgccctgctggca
cgtattgccgaagaatcgggcgcgcctgtgcctgccatccaagccagcgacctggaaaaa
ctcggctgcctgcgactgcctggcaatgtgcgcgagttggaaaacctgttacaccgggcc
gtcgctcttgggaatggtgaatccttgcagtttgatgccttttccacaccggtttccgat
ggtttgtcggccttcccagctcaaacgtcacccatggatcacgcggtcattccaagcgat
ttgcaacaacatctggacgatctggagcgtcaaattctgcgtcgcgcattacaagctacc
ggcttcaatcggaccgccgctgcggcgcaacttggcctgagcttgcggcagatgcgttac
cggattgcccgcttgcacattgattcggcccaacaagatgacaccgatgtggcccccgtc
tga
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