Rhodoferax lithotrophicus: MIZ03_4139
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Entry
MIZ03_4139 CDS
T10289
Name
(GenBank) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MIZ03_4139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_4139
Enzymes [BR:
rlh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
MIZ03_4139
DNA repair and recombination proteins [BR:
rlh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MIZ03_4139
Prokaryotic type
MIZ03_4139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_8
HHH_5
EndIII_4Fe-2S
RecR_HhH
Cdd1
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BCO29225
UniProt:
A0ABM7MSR2
LinkDB
All DBs
Position
complement(4256988..4257911)
Genome browser
AA seq
307 aa
AA seq
DB search
MLQQTQVGTVLAYFERFLGKFPHVAALSDASLDEVLGLWSGLGYYSRARNMHRCAQEVMH
RYAGVFPQTAQQLQALPGIGPSTAAAIASLCFSERVAILDGNVKRVLTRYLGFASDLSVA
GNERQLWQLANSLLPHTDLINAMPRYTQGMMDLGATLCTLRKPACASCPLQNRCVANLQS
NPLAFPVKTRRIKRSAQSIWMLWARTDEGALWLEPRPTPGVWAGLYCFTLFDTRQALLAA
VPDAYRVHLIDLPVVKHVLTHKDLHLHPVQLELPGTCSPNVSGAWFEPTQWEQLGMPAPV
RKLLHSS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcagactcaggttggaaccgtcctagcttattttgaacggtttttaggcaag
tttccgcatgtggcagccttgtctgatgcttcgttggacgaggtgttgggtttatggagt
ggtttggggtactacagtcgcgcacgtaatatgcaccgctgcgctcaagaggtgatgcat
cggtacgcaggtgtgtttccgcaaacggctcagcaattgcaagccttgcctggtattggg
ccatccacggcagcagcgattgcttcattgtgtttcagtgaacgggtcgcgattctggat
ggcaatgtcaaacgggttttgacacggtacctcggctttgcatcagatttatctgtggcg
ggtaatgagcggcaattgtggcaattagctaactctttgctgccgcatactgatttgatc
aacgccatgcctcgttacacccaaggcatgatggatttgggggccacactgtgcaccctc
agaaaacccgcgtgtgcatcttgccctttgcaaaatcggtgcgtagccaatttgcagtcc
aatcctttggcttttccagtgaaaacacggcgtatcaaacgcagcgcccaatccatttgg
atgctttgggcacgtactgatgaaggggcgttgtggctggagccgcggccgactcccggt
gtttgggctgggttgtattgttttaccctgtttgatacccggcaggctttgctggccgca
gtgcctgatgcatatcgtgtgcatctgattgatttacccgttgtgaagcatgtgctgacg
cacaaagatctgcatttacacccggtgcagctggaattgcctggcacgtgctctcctaac
gtctctggggcctggtttgagcccacacagtgggagcaactgggcatgcctgcccccgtg
cgcaagttattacattcgtcctag
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