Rhodoferax lithotrophicus: MIZ03_4163
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Entry
MIZ03_4163 CDS
T10289
Name
(GenBank) peptidoglycan D,D-transpeptidase PenA
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00550
Peptidoglycan biosynthesis
rlh01100
Metabolic pathways
rlh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MIZ03_4163
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MIZ03_4163
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rlh01011
]
MIZ03_4163
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rlh03036
]
MIZ03_4163
Enzymes [BR:
rlh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MIZ03_4163
Peptidoglycan biosynthesis and degradation proteins [BR:
rlh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MIZ03_4163
Chromosome and associated proteins [BR:
rlh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MIZ03_4163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BCO29248
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Position
4278123..4279856
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AA seq
577 aa
AA seq
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MSRSIAYTSSPLLASPTPVWRSKFIVASIALGFAALVGRAVYIQVIENDFFQKQGEVRFA
RTLSLPANRGRILDRNGVILASSIPVPSIWAIPEDVPRDPQGLKKLADLLNMSLPELNKK
LEDEDKTFVWLRRQVDESVGKEVLALGLKGIYERKEYKRQYPEGEAAAHVVGFTNVEDKG
QEGMELTFNKELGGRAGSRRVIKDRMGRVVEDVREQIAPVDGRDLQLSIDSKVQFFAYQT
LKNAVLEHKAKAGSVVVLDVQTGEVLALANYPSFVPDKRQNLSGAQLRNRALTDTFEPGS
TMKPFVIAAALNKGMVTPETPIQTAPGRLTIGSATISDSHAHGILTVSEVIQKSSNIGTA
KIALQMPAHDMWEMYTQVGFGQKPDVPFPGAVSGRLRPYKSWRPIEQATMSYGYGISVSL
FQLAHAYTIFGRDGDLVPISMFKINQHTPGTSVIEARHALEVRNMLHLVTGPGGTAPKAQ
TMGYSVGGKTGTAHKVEGRGYANKKYRGVFAGLAPIDAPRIAVAVMIDEPSNGQYFGGDV
AAPVFSQTVQQTLKVLGVAPDMTVKPQIVTQPVEESF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcatcgcctacacctccagcccgttgctggccagcccgacaccggtatgg
cgcagcaaatttattgtggcgagcattgcgctggggtttgctgcgctggtggggcgtgcg
gtttacatccaggtgattgaaaacgactttttccagaagcaaggtgaagtgcgctttgcc
cgcaccctgtccttacccgccaaccgggggcgcattctggaccgcaacggcgtgattctg
gcctccagcattccggtgcccagcatctgggccattcccgaagacgttccgcgtgatccg
cagggcttaaaaaagctggccgacctgctcaacatgagcttgccagagctgaacaaaaag
ctcgaagatgaagacaagacctttgtctggttacgccgccaggtcgatgagtcggttggc
aaagaagtgctggccctgggtctcaaaggtatttatgagcgcaaagaatacaagcgtcaa
tacccggaaggcgaagccgcggcccacgtggtcggcttcaccaatgtggaagacaaaggc
caggaaggcatggaactgacctttaacaaggaattgggcggccgtgccggttcccggcgc
gtcatcaaggaccgcatgggccgggtggtggaagatgtacgcgagcaaattgccccggtg
gatgggcgcgacctgcagctcagcattgacagcaaagtgcagttttttgcctaccaaacc
ctgaaaaacgccgtgctggagcacaaggccaaagcgggcagcgtggtggtgctggatgtt
cagaccggcgaggtactggcactggccaactaccccagttttgtgcccgacaaacggcaa
aacctcagcggcgcacagttgcgcaaccgggcgctgaccgacacctttgagcccggctcc
accatgaaaccctttgtgattgcagccgcactgaacaaaggcatggtcacccccgagacc
cccattcaaaccgccccagggcgcttgaccattggcagcgccaccatcagcgactcacat
gcgcacggcatactgacggtcagcgaggtgatccagaagtccagcaacattggcaccgcc
aagattgccctgcaaatgcccgctcacgacatgtgggagatgtacacccaggtcggtttt
ggccaaaagcccgacgtcccctttcccggtgccgtgagtggccgcctgcgcccctacaaa
agctggcgcccgattgaacaagccaccatgagctacggttatggcatttcggtcagcttg
ttccagctggcgcacgcctacaccatctttggtcgcgatggcgatctggtgccgatcagc
atgttcaagatcaaccagcacacgccagggacatccgtgattgaagcccgccatgcgctg
gaggtacgcaacatgctgcatctggtgaccggtccagggggtactgcccccaaagcccag
accatgggctattcggtcggtggcaaaaccggcaccgcccacaaggttgaaggccgtggt
tatgccaacaaaaaataccgcggcgtatttgccggactggctcctattgatgcgccgcgc
attgcggtggcggtgatgattgacgaacccagcaacggtcaatatttcggtggggatgtg
gccgcgcccgtgttcagccagaccgttcagcaaacactcaaggtgctgggtgtcgcgcca
gacatgaccgtcaagccacaaatcgtgacccagccggtggaggaaagtttctga
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