Rhodoferax lithotrophicus: MIZ03_4165
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Entry
MIZ03_4165 CDS
T10289
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00300
Lysine biosynthesis
rlh00550
Peptidoglycan biosynthesis
rlh01100
Metabolic pathways
rlh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MIZ03_4165
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MIZ03_4165
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MIZ03_4165
Enzymes [BR:
rlh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
MIZ03_4165
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BCO29250
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Position
4281379..4282803
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AA seq
474 aa
AA seq
DB search
MSAMMTMAQIGSWLAQAQPVNLGADQAGVQIHRVHTDTRSIEPGDLFVALRGERFDANDF
LAEAQRQGAVAAICQGDTAAAKLAQAGLPGWVVPDAKLALAQLATTWRAQFSLPLIAVTG
SNGKTTVTQMIASILRTWQGEASLATQGNLNNDIGVPLTVLRLRAQHRVAVVELGMNHPG
EIATLAAIAQPTVALVNNAQREHLEFMGSVASVAQENGSVINALPADGVAVFPLDDAYSA
LWSHTAGSRQQVRFATDAANHPNLSVTQAVWADAAWQVSASTPAGTLTYRLHIAGEHNVK
NSLAACACALAAGAPLSTIAAGLQAFEPVKGRSRARLIQLDGRAVTLVDDTYNANPDSVR
AAIDVLAALPAPRLLVLGDMGEVGNQGPEFHREALQLAVQKNIEKVLVMGSASAQAAMNF
DDIEVHSEMTDLQTAVLSALPGITSVLVKGSRFMKMERVVDAICAKADKEPAAC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccatgatgacgatggcgcaaatcggttcgtggctggcacaagcccagcccgtg
aacctgggtgcagatcaagctggtgtacagattcaccgcgtgcacaccgacacccgcagc
attgaaccgggtgacctgtttgtggccttgcgtggtgagcgttttgatgccaatgacttc
ctggcagaggcccaacgccaaggggccgttgccgccatttgccagggcgacaccgcagcc
gccaagctggcccaggccggcctgcccggctgggtggtgcccgatgccaagctggcactg
gcccaactggcaaccacatggcgcgcccaattcagcttgccgctgatcgccgtcaccggc
tccaacggcaaaaccaccgtgacacaaatgattgccagcatcctgcgcacctggcagggt
gaagccagcctggccacccaaggcaatttgaacaacgacattggggtaccgctgaccgtc
ctgcgcctgcgcgcgcagcaccgcgtggcggtggtcgagctcggcatgaaccaccccggc
gaaattgccaccctggccgccattgcccagcccaccgtggcactggtcaacaacgcccag
cgcgaacacctggagttcatgggctcggtggccagcgtggcgcaagaaaacggctcggtg
attaacgcgctgcctgccgatggtgtggccgtcttccccctggatgacgcttacagcgca
ctctggagccacaccgccggcagccgccaacaggtacgttttgccaccgatgcagccaac
caccccaacctgagcgttactcaggcggtctgggccgatgcggcctggcaagtcagcgcc
agcacacctgcaggcaccttgacctaccgcttgcacatcgccggcgagcacaacgtcaag
aattccctggcggcttgtgcctgcgccctggctgcaggggcgcccttgtcgaccattgcg
gcgggcctgcaggcgtttgagccggtcaagggccgctcacgtgcacgactgatccagctt
gatgggcgtgccgtcacgctggtcgacgacacctacaacgccaacccggactcggtgcgc
gcagccattgacgtgctcgccgccctgcccgcgccacgcctgctggtactgggggacatg
ggtgaagttggcaaccagggccctgaatttcaccgcgaggccttgcagctggcggtacaa
aaaaatatagaaaaagtgcttgtgatgggctctgcttctgcgcaagcagctatgaatttt
gatgatattgaagtgcattccgagatgactgatttacaaactgccgtgttatctgcgctg
ccgggtatcaccagcgtgctggtcaaaggctcgcgcttcatgaagatggaacgggtggtg
gatgccatctgtgccaaggctgacaaggagcccgccgcatgttga
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