Rhodoferax lithotrophicus: MIZ03_4184
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Entry
MIZ03_4184 CDS
T10289
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00061
Fatty acid biosynthesis
rlh00071
Fatty acid degradation
rlh01100
Metabolic pathways
rlh01212
Fatty acid metabolism
rlh02024
Quorum sensing
rlh04146
Peroxisome
Module
rlh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MIZ03_4184
00071 Fatty acid degradation
MIZ03_4184
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MIZ03_4184
09145 Cellular community - prokaryotes
02024 Quorum sensing
MIZ03_4184
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rlh01004
]
MIZ03_4184
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rlh04147
]
MIZ03_4184
Enzymes [BR:
rlh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MIZ03_4184
Lipid biosynthesis proteins [BR:
rlh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MIZ03_4184
Exosome [BR:
rlh04147
]
Exosomal proteins
Exosomal proteins of breast milk
MIZ03_4184
Exosomal proteins of breast cancer cells
MIZ03_4184
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
LPD22
Motif
Other DBs
NCBI-ProteinID:
BCO29269
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All DBs
Position
4300191..4302137
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AA seq
648 aa
AA seq
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MQTTFPRLLLNHATQRPHDAAMREKEYGIWQAITWGEMAAMVEQLACGLHQAGLRQHDHM
IVIGANRPRLYATMLAVQSLGAVPIALYQDAAAPECVFPINNAEVCFAFAEDQEQVDKLL
EIREQCPQVAHIYFDDPRGLRNYDEPGLQSLDDLIAAGKVFAAQNTGFFKSEVDKVQPDD
VAAMFFTSGTTGNPKGVVHTHDTLLNRARAGAEFDKLTHAEDVLAYLPPAWIGQNIFSYA
QWLSCGYVVNCPESAATVTIDLKEIGPTYYFAPPRVFEGLLTSVMIRMEDAGAIKRKMFH
TFMNVAKRVGPSLMDGKVVGLADRVMYGLGNFLVYGPLRNNLGFSRVRVAYTAGEAIGPD
LFSFYRSIGVNLKQLYGSTETAVFVCLQPDHEARADTVGVPCKGVEIKVAANGEILVKSP
GLLKGYFKNPEATAEVLTADGWYHTSDAGFLDAHGHLKIIDRVKDVGRIKGGTNDGAMFA
PKYVENKLKFFQHIKEVVAYGDGREKVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPD
VYQLIKECVEKVNADLSEDTLLAGSQVSRFLILHKELDADDGELTRTNKVRRGFIAEKYN
VLVDALYGGKTSQFIETLVKFEDGRTGSVSATLRIDDAKTFVPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacgtttccccgattactgttgaaccacgcaacgcagcgcccgcatgacgca
gccatgcgtgaaaaagaatacggcatctggcaagccatcacctggggcgaaatggctgcg
atggttgaacaactggcctgtggcctgcaccaagctggcctgcgccagcatgaccacatg
attgtgattggtgctaatcggcctcgtctgtacgcaaccatgctggcggtgcaatctttg
ggggccgtgccgattgcgctgtaccaagacgcagcagcaccggaatgcgtatttcccatc
aacaatgccgaagtttgtttcgcctttgccgaagaccaggagcaggtagacaaattactg
gagattcgcgagcagtgcccacaagtcgcccatatttattttgatgacccgcgcggtctg
cgcaattacgacgagcctggcctgcagtcactggacgacttgatcgccgcaggcaaggtg
tttgcggcacagaacacgggctttttcaaatctgaagttgacaaggttcaacctgatgac
gtggccgccatgttctttacctccggcaccaccggcaaccccaagggcgtggtgcacacc
catgacaccttgctcaaccgggcacgcgccggggccgagtttgacaagctgacccatgcc
gaagatgtgctggcgtatttgccaccggcctggatcgggcaaaacattttttcttacgca
cagtggctgagctgtggctacgtggtgaactgccccgagtccgccgccacggtaactatc
gacctgaaagagattggccccacttattactttgcaccgccccgcgtattcgaaggtttg
ctgaccagtgtgatgatccgcatggaggatgccggtgccatcaaacgcaaaatgtttcac
accttcatgaacgtggccaaacgggtcggcccgagtctgatggacggcaaagtggtcggc
ctggcggatcgtgtgatgtatggtctgggcaactttttggtctatggccccttgcgcaac
aacctgggctttagccgggtgcgggtggcctacaccgcaggtgaagccattgggccggac
ttgttcagtttttaccgctcgattggggtcaacctgaagcagctctatggctcgactgaa
acagcggtgtttgtctgcctgcaacccgaccatgaagcccgtgctgacaccgtaggtgtg
ccctgcaagggggtggagatcaaggtggcggccaacggcgagattctggtcaagtccccc
ggtctgctcaaaggttatttcaagaaccctgaagccaccgctgaagtgctgaccgcagac
ggctggtaccacaccagtgatgcggggtttctggatgcgcatggccacctgaagatcatc
gaccgggtgaaagacgtgggccgcatcaaaggggggaccaatgacggggccatgtttgca
cccaaatatgtggaaaacaaactcaagttcttccagcatatcaaagaggtggtggcctat
ggtgatggacgcgaaaaagtctgcgtgatgatcaacatcgactttgatgccgtcggtaat
tgggccgagcgccgcaacctgccctatgcaggctataccgatctggcccaaaagcccgac
gtgtaccaactcatcaaggaatgtgttgagaaggtgaacgccgatctgagcgaagacacg
ttgctggcaggtagccaggtcagccgtttcctgatactgcacaaagagctggatgcggat
gacggtgagctgacccggaccaacaaggtgcgccgcggcttcattgcagaaaaatacaac
gtgctggtggatgcgctttacggcggcaaaacctcgcagttcattgaaaccttggtcaaa
tttgaagatggccgcacgggcagtgtcagtgcgaccttgcgcattgacgatgccaagact
tttgtgcctgtcaaggcagcagcctga
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