Rhodoferax lithotrophicus: MIZ03_4267
Help
Entry
MIZ03_4267 CDS
T10289
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MIZ03_4267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlh03400
]
MIZ03_4267
Enzymes [BR:
rlh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MIZ03_4267
DNA repair and recombination proteins [BR:
rlh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MIZ03_4267
Prokaryotic type
MIZ03_4267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCO29344
UniProt:
A0ABN6DEC5
LinkDB
All DBs
Position
complement(4384144..4384860)
Genome browser
AA seq
238 aa
AA seq
DB search
MPSQLAHADPALWTVAPSWQALVERFFASDAGRKLQLFLQNRLSEGAVIFPPQPLRALAL
TGLESVRMVILGQDPYHGRGQAEGLAFSVAPGVALPPSLRNIFKELQRDLGEPVPSFPQP
GGSLVRWARHGVLLLNTCLTVEEGQAASHSGKGWEVLTDAIIKEVSDQSAHVVFMLWGSH
AQSKRVLIDASRHLVLCANHPSPLSALRPPVPFIGCGHFSQARAWRNQHELKKNGKIS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccaactggcacacgctgatcctgcgttatggactgttgcgccgagctggcag
gccttggtcgagcgttttttcgcctcagatgcagggcgaaagctgcaactgttcctgcaa
aaccgattaagcgaaggggccgtcatttttccgccgcaaccgctgcgtgcattggcgttg
acgggtttggagtcggtgcggatggtgattctggggcaagacccttaccatggtcgtggc
caagcggaaggattggcgttttcggtggcacccggcgtggctttgccgccgtcgttgcgc
aatattttcaaagaattgcagcgcgatctgggggagcctgtgccatctttcccgcagcca
ggtgggagccttgtgcgctgggcgcgacatggtgtgctcttgctcaacacgtgtttgacg
gttgaagaaggccaggccgcaagccattcgggtaaaggttgggaagtgttgaccgatgcc
atcatcaaagaagtgtccgaccagtcggcgcatgtggtcttcatgctgtggggcagtcat
gcccaaagcaaacgggttttgattgatgcatcacgccatttggtgttgtgtgccaaccac
ccttcgccactttcggctttgcgaccaccggtaccatttataggctgtggtcatttttct
caagctcgggcatggcgaaatcagcacgaattaaagaaaaatggaaaaatttcataa
DBGET
integrated database retrieval system
