Rhodoferax lithotrophicus: MIZ03_4438
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Entry
MIZ03_4438 CDS
T10289
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rlh Rhodoferax lithotrophicus
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlh03032
]
MIZ03_4438
Enzymes [BR:
rlh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MIZ03_4438
DNA replication proteins [BR:
rlh03032
]
Prokaryotic type
DNA Topoisomerases
MIZ03_4438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
Zn_ribbon_PADR1
Spore_SspJ
Motif
Other DBs
NCBI-ProteinID:
BCO29515
LinkDB
All DBs
Position
4561069..4564020
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AA seq
983 aa
AA seq
DB search
MKTLVIAEKPSVAQDIVRALTPVSGKFEKHDEHFENDTHVVTSAVGHLVEIQAPEAFDVK
RGKWSFAHLPVIPPHFDLKPVDKTKTRLNAVVKLAKRKDVGQLINACDAGREGELIFRLI
EQYAGGAKPLGKPVQRLWLQSMTPQAIREGFGALRSNAQMQPLADAARCRSEADWLVGIN
GTRAMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEQIRKFISRDYWEIHASFAAQAGNY
PAKWFNPAHKKDADDAEKKADRVWSELDARTIAEAVRGQQATVSEESKPTSQASPALFDL
TSLQREANSKFGFSAKTTLSIAQSLYERHKALTYPRTDSRALPEDYVPVVKQTFEMLADS
GLKHLAPHALTALNNNYIRPSKRIFDNAKVSDHFAIIPTLQAPGALSETEQKIYDLVVRR
FMAVFFPAAEYQVTTRISKVQEHHFKTEGKVLVKPGWLAIYGKEAALEVEGGKDGDKGQS
LVPVAPGEKVKAESVDPKGLKTRPPARYSEATLLGAMESAGKTVEDDELREAMQEKGLGT
PATRSSIIEGLISEAYMLREGRELIPTAKAFQLMTLLRGLDVQELTKAELTGEWEYKLNQ
MEHGKLSRTAFMSEIAAMTERMVKKAKEYDRDSVPGDFATLHTPCPNCGGIVKENYRRYG
CTGADGQSEGCGFSFGKTPAGRTFELAEVEQFLRDRKIGPLTGFRSKAGWPFVAEMVIKF
DEDSKNYKLEFDFGDDKKGEETGELVDFSAQTSLGACPQCGAAVFEHGKNYVCEKSVPTA
AQATPSCEFKTGQIILQQPIEREQMVKLLATGKTDLLDKFVSMRTRRTFKAMLAWDATAG
KVNFEFAPSKFPPRKTAATPLTKAAVSSKSRAASAASTVTTGQKPLKTPAKRTAKPAAAK
TPRKTPAAGAGSTPSAALAAVIGSEPIARAQVIKKLWDYIKANKLQDAANKRAINADAKL
LAVFGKPQVTMFELAGIVGQHLG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttggtgattgccgaaaaaccttccgtggcacaagacatcgtgcgcgccctg
accccggtgtcaggcaagtttgaaaaacacgacgaacattttgagaacgacacccatgtg
gtcaccagtgccgtaggccatctggtggaaatccaggctccagaagcctttgatgtgaaa
cgcggcaaatggagctttgcccacctgccggtgattccgccccactttgacctgaaaccg
gtcgacaaaaccaaaacccgcctgaatgcggtggtgaaactggccaaacgcaaagacgtg
ggccaactcatcaacgcctgcgacgcgggccgcgagggtgagctgatctttcgcctgatc
gagcaatacgctggtggtgccaaacccctgggcaaaccggtacaacgcctgtggctgcaa
agcatgacaccgcaagccattcgcgaaggctttggcgccctgcgcagcaatgcccagatg
cagccgctggctgacgcggcacgctgccgctccgaggccgactggctggtcggcatcaac
ggcacacgcgccatgaccgcgttcaactcgcgtgacggcggcttctttctgaccaccgtg
ggccgggtgcaaaccccgacgctctcggtggtggtggagcgcgaggaacaaatccgcaag
ttcatcagccgcgattactgggaaatccatgcctcattcgccgcccaggcgggcaactac
ccggccaagtggttcaacccggcgcacaaaaaagacgctgatgatgccgaaaagaaggca
gatcgcgtctggagcgagctggatgcacgcaccattgccgaagcagtgcgcggccaacaa
gccacggtttcagaggaaagcaaacccacctctcaggcttcgcctgccctgtttgacctg
accagcctgcaacgcgaagccaacagcaagttcggcttcagcgccaaaaccaccctgtcc
atcgcccaaagcctgtacgaacgccacaaagccctgacctacccacgtaccgactcacgt
gccctgcccgaagactatgtgccggtggtgaaacaaacctttgaaatgctggccgacagc
ggcctgaaacacctggcaccccacgcactcacggccctcaacaacaactacatccgcccc
agcaagcgtattttcgacaacgccaaggtgagtgatcactttgccatcatccccacatta
caagcgcctggagcgctctcggaaacagagcaaaaaatttacgacctggtggtgcgccgc
ttcatggcggtgtttttccctgcggctgaataccaggtcaccacacgtatctccaaggtt
caggagcaccatttcaaaaccgaaggcaaggtgctggtcaagccgggctggctggccatt
tacggcaaggaagccgcactggaagtcgagggcggcaaagacggtgacaaggggcaaagt
ctggtgccggtagcgcctggcgaaaaggtcaaggccgagtccgtcgaccccaaaggcctg
aaaacccgcccacccgcacgctactcagaagccaccctgctcggcgccatggaaagcgct
ggcaaaaccgtggaagacgacgaactgcgcgaagccatgcaggagaaaggcctgggcacc
ccggccacccgctccagcatcattgaaggtttgatctccgaggcctacatgctgcgcgaa
ggccgcgagctgatccccaccgccaaggcgttccagctgatgacactcttacgtggcctg
gacgtacaagagctgaccaaagccgaactcaccggcgaatgggaatacaagctcaaccag
atggagcacggcaagctcagccgtacggccttcatgagtgagattgctgccatgaccgaa
cgtatggtgaaaaaagccaaggaatacgaccgcgacagcgtaccgggcgactttgccacg
ctgcacacgccctgccccaactgcggtggcatcgtcaaggaaaactaccgccgttatggc
tgcaccggcgctgatggccagagtgagggctgcggtttttcatttggcaaaaccccggcc
ggacggacttttgagctggctgaagttgagcagtttttgcgtgaccgcaaaatcggcccc
ctgaccggctttcgctccaaagctggctggccctttgtggccgaaatggtcatcaagttt
gacgaggacagcaaaaactacaagcttgaatttgactttggcgacgataaaaaaggcgag
gaaaccggtgagctggtcgatttttcagcccagaccagcttgggtgcctgcccccaatgt
ggtgctgccgtgtttgagcacggcaaaaattatgtgtgcgaaaaatccgtccccaccgcg
gcacaggctacccccagttgcgagttcaagaccggccagatcatcctgcagcaaccgatt
gaacgcgagcaaatggtcaagctgctggccaccggaaaaaccgatctgctggacaagttt
gtcagcatgcgcacccggcgcaccttcaaggccatgctggcctgggatgccaccgcgggc
aaggtcaattttgaatttgccccgagcaaattcccgccacgcaagacagcagcgacaccg
ttgacaaaagctgctgtctcttcaaaatcacgagctgctagcgcagcatctacggtaact
acaggccaaaaacccttaaaaacaccggctaaaaggactgccaaaccagctgccgccaaa
acaccacgcaaaacacctgccgccggggcgggttctacgcccagtgcagcactcgctgca
gtgatcgggtctgagccgattgcccgcgcccaggtcatcaaaaaactgtgggactacatc
aaggccaacaagctgcaggatgccgccaacaaacgcgccatcaacgccgatgccaagctg
ctggcggtatttggaaaaccccaggtgaccatgtttgaactggcgggcatcgtgggccaa
catttggggtga
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