Rhodoferax lithotrophicus: MIZ03_4458
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Entry
MIZ03_4458 CDS
T10289
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rlh Rhodoferax lithotrophicus
Pathway
rlh00071
Fatty acid degradation
rlh00362
Benzoate degradation
rlh00650
Butanoate metabolism
rlh01100
Metabolic pathways
rlh01120
Microbial metabolism in diverse environments
rlh01200
Carbon metabolism
rlh01212
Fatty acid metabolism
Module
rlh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rlh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MIZ03_4458
09103 Lipid metabolism
00071 Fatty acid degradation
MIZ03_4458
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MIZ03_4458
Enzymes [BR:
rlh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MIZ03_4458
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Methyltransf_12
DAO
Pyr_redox_2
NAD_binding_2
F420_oxidored
DXP_synthase_N
ApbA
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BCO29535
UniProt:
A0ABN6DC79
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All DBs
Position
complement(4583840..4585885)
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AA seq
681 aa
AA seq
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MYELHGTIAVITLNNPPVNSLSAALRQHIAAAVRQAELDPAVTGLVLIGHTKAFSAGADV
TEFGTPLQLAEPMLGQLLAHIEACPKPVVAALSGVALGGGLELALACHGRVALETARLGL
PEINLGLIPGAGGTQRLPRLAGLSTALAMIQSGAPQTGKQLAESGLLDQVVAEDLLPAAL
QRAAELARLGAPFPQARERSLDPVLVQKFVSEQQDKLTPRQRLQSAYTAQLEALSAAASD
WPEGLRRERELFLQLQSSSQSQALRYQFFAEREAGKLPVVWQAEPRAVHTVAIIGAGTMG
AGIAICALNAGLRVILLEQDDAALQRGQQRVTEHYQSRVQAGKMKATVAAAAEARLVPST
DWTQLVQADLVIEAVFEDLAVKQEVFKKIDAHARPGAVLATNTSYLDVDAIAHMTQRPAD
VLGLHFFSPANVMKLLEVVRGTHTAADVLATGMALGKTLKKLPVLTGNAFGFIGNRIYNA
YRKQCEFMLEDGAWPEEVDSALQAFGLAMGPFAVADLSGLDIAWRMRKAQAASRDPRERY
VAILDQLCEQGRLGRKTGAGYYSYSAGRQVKTTDAVVRDIITQASTQRGITRHTLTATDI
QRRALLAMVNDAALLLAEGVASRASDIDVVLAQGYGFPRWEGGPVFWARQQDRAALEQDL
HTMAAQSGHGFKVADLSVLLD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaactccacggcacgattgccgtcatcacgctgaacaacccacccgtgaacagc
ctgagtgcggccttgcgccaacacattgccgccgccgtgcgccaagccgaattggaccct
gccgtgacaggcctggtgctgatcggccataccaaagcgttttctgccggggccgatgtc
accgaatttggaacacccttgcaattggctgagccgatgcttggccagttgttggcgcac
atcgaagcctgcccaaaaccggtggtagccgccctgagtggggtggcgctggggggtggg
ctggagctggccctggcctgccatggccgtgtggcgctggagacggccagattaggcctg
ccggaaatcaacctggggctgatcccaggcgcaggcggcacacagcgtttgccacgcctg
gcaggcctcagcaccgcgctggccatgatccaaagcggcgcaccacaaaccggcaaacaa
ttggccgagtctggtttgcttgaccaagtggtggcggaagatctgttaccggcggccctg
cagcgagccgctgaactggcccgtctgggtgcgccttttccccaggcgcgtgagcgttct
cttgatccggtgctggtacagaaatttgtcagtgaacaacaagacaagctcaccccgcgc
caacgcctgcaaagcgcctacaccgcccagctcgaagccttgagcgccgccgccagtgac
tggccagagggcttgcgccgtgaacgtgagctgtttttgcagttgcagtccagcagccag
tctcaagcactgcggtaccagttttttgccgaacgcgaagccggcaagttacccgtggtc
tggcaggcggagccacgtgctgtccacaccgtggccatcattggcgcaggcaccatgggc
gcgggtattgccatttgtgcgctgaatgccggtttacgggtgatcttgctggagcaggac
gatgccgccttgcagcgcggccagcagcgtgtgaccgagcattaccaaagccgtgtccag
gccggaaaaatgaaggcgactgtggccgctgccgcagaagcccgcctggtccccagcaca
gactggacgcagctggtccaggcggatctggtgatcgaggcggtgtttgaagacctggcc
gtcaaacaagaggtgttcaaaaaaatcgatgcccacgcccgccccggtgcggtgctggcc
accaatacctcgtacctggacgtggatgccattgcccacatgacccagcgcccggccgat
gtgctggggctgcactttttcagcccggccaatgtcatgaaactgctggaggtggtgcgt
ggcacccatacggcggcagacgtgttggccaccggcatggccttgggcaagactctgaaa
aaactgccggtgctgaccggtaatgcgtttggttttattggcaaccgcatctacaacgct
taccgcaagcagtgtgaattcatgctggaagacggggcctggcccgaagaggtggacagc
gcgttacaagcctttggtttggccatggggccgtttgccgtggccgacttgtccgggctg
gacattgcctggcgcatgcgcaaggcacaggccgccagccgtgacccgcgtgagcgctac
gtggccatcctcgaccaactgtgtgagcagggtcggctgggacgcaaaaccggcgcgggt
tattacagctacagcgcgggcaggcaggtcaaaaccaccgatgccgtggtgcgcgacatc
attacccaggcctccacacaacgcggcatcacccggcacaccctcacggccaccgacatc
cagcgccgtgccttgctggccatggtcaatgatgcggcactgctgctggccgaaggggtg
gccagccgtgccagtgacatcgacgtggtgctggcccagggctatggatttccgcgctgg
gaaggtggcccggtgttctgggcccgccagcaagaccgcgccgcactggaacaagacctg
cacaccatggccgcccagtcggggcacggcttcaaggtggccgatttgtccgtgctgctt
gactga
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