Roseobacter litoralis: RLO149_c000640
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Entry
RLO149_c000640 CDS
T01572
Name
(GenBank) putative HTH-type transcriptional regulator, AraC family
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c000640
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RLO149_c000640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
AEI92096
UniProt:
F7ZDX7
LinkDB
All DBs
Position
complement(68313..69296)
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AA seq
327 aa
AA seq
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MPEPSSTRAYAFVLIPGYSQLGFACALEALSLANRYPAGGPCYRWRLLSETGEPVAAYNG
VKIGVDGALTELDRHETIVICAGEDVGNATSKRLIHWLRRETRRGMDYGALSSGTYVLAL
AGLLSGKRVTTHWEYRAALTESLPDVIVEDAIFSVDGSTFTTAGGAASMDMMLQRIQADH
GVELATWVADQMVYTDPRLPNHTQRAALHTRSQVRNGKLAMALQVMENNIEDPLTPEEIA
TIVELSTRQLERLFSKYINVSPKRYYLKLRLEKARDLLRQTDLSVTDVCVACGFKSLSHF
SKSYRTAYGISPGLEDGSAKLVWRGGL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccagcagcaccagagcctatgcattcgtcctaatcccggggtattcgcaa
cttgggtttgcctgcgcactcgaagcactgagccttgccaaccgctatcccgcaggtggc
ccctgttacaggtggcgattgctgagcgaaacaggtgaacccgttgcagcttataacggg
gtgaaaatcggcgtagacggcgcgctcactgagttggaccgacatgaaaccatcgtcatt
tgcgcaggtgaggatgtcggcaacgcaacatcaaaaaggctgatccactggctgcggcgc
gagacacgacgcggcatggactacggtgccttatcctccggaacctatgtgctggccctt
gccgggttgttatcaggcaaacgcgtgacaacccattgggagtaccgcgccgccctcacc
gaaagcctgccagatgtgattgtcgaagatgcaatcttttccgttgatgggtcgacattt
accacggcggggggggccgcatccatggatatgatgttgcaacgcattcaggcagatcat
ggtgttgagttggcgacatgggtcgctgaccaaatggtctataccgatccgcgcctgcca
aaccacacccagcgcgcggcactgcatacaaggtcacaggtgcgtaacggcaagctggca
atggcgttgcaagtcatggaaaacaacatcgaagacccgctgacccccgaagaaatcgca
accatcgttgagttgtccacccgccagttggaacgattgttttcaaagtacatcaacgtg
tcccccaagcggtattatctgaaactgcggcttgagaaagcgcgcgacctgttgcgccaa
acggacctctcggtcacggatgtctgcgtggcctgcgggttcaaatccctgtcacatttt
tcaaaaagctaccgtacagcctatggcatcagcccgggccttgaagatggaagtgccaaa
ctggtctggcgcggcggcctctag
DBGET
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