Roseobacter litoralis: RLO149_c002390
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Entry
RLO149_c002390 CDS
T01572
Name
(GenBank) HTH-type transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c002390
03036 Chromosome and associated proteins [BR:
rli03036
]
RLO149_c002390
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RLO149_c002390
Chromosome and associated proteins [BR:
rli03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RLO149_c002390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR_2
HTH_IclR
MarR
HTH_Crp_2
Fe_dep_repress
HTH_5
HTH_20
DUF7343
HTH_34
LexA_DNA_bind
AsnC_trans_reg_3
HTH_11
LytTR
Xre-like-HTH
TrmB
HTH_1
Rrf2
RHA1_ro05818_N
CtsR
E3_UFM1_ligase
Motif
Other DBs
NCBI-ProteinID:
AEI92270
UniProt:
F7ZFT0
LinkDB
All DBs
Position
239853..240329
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AA seq
158 aa
AA seq
DB search
MNCVRMTLDTTDKRILSALQRAGRMSNADLSDAVNLSPSACHRRVQRLEKDGYIKDYVAL
LDARKMGVPTTVFVEITLQAQADEVLDAFEKAVARIPDVLECHLMAGSADYLLKVVAENT
DDFARIHRQYLARLPGVAQMQSSFALRTVFKTTALPVT
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgtgcgaatgacgcttgataccacagacaaacgtatattgagcgctcttcag
cgcgcgggacgcatgtcaaacgccgacctcagcgatgcggtcaacctgtcgccctctgcc
tgtcaccggcgtgttcagcgtctggaaaaagacgggtatatcaaggactacgtggccctt
ctggacgcgcgcaagatgggtgtgccgacaaccgtttttgtggagattacgctgcaggcg
caggcggatgaagtgctggatgccttcgagaaagcagtggcgcgcatcccggatgtgctg
gagtgtcacctgatggcgggatctgcggattacctgctgaaagtggtggctgaaaacacg
gatgatttcgcccgtatccaccgccaatacctcgcgcgcctgcccggtgtggcgcaaatg
cagtcaagctttgcgctgcgcacggtgttcaaaacgacagccttgcctgtgacatga
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