Roseobacter litoralis: RLO149_c002500
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Entry
RLO149_c002500 CDS
T01572
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rli
Roseobacter litoralis
Pathway
rli03030
DNA replication
rli03430
Mismatch repair
rli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLO149_c002500 (dnaX)
03430 Mismatch repair
RLO149_c002500 (dnaX)
03440 Homologous recombination
RLO149_c002500 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rli03032
]
RLO149_c002500 (dnaX)
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c002500 (dnaX)
Enzymes [BR:
rli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLO149_c002500 (dnaX)
DNA replication proteins [BR:
rli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RLO149_c002500 (dnaX)
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RLO149_c002500 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_30
AAA_22
AAA_5
AAA_16
AAA_14
AAA_19
AAA_24
AAA_18
Rad17
SLFN-g3_helicase
AAA_assoc_2
Glyco_tranf_2_5
AAA_2
TsaE
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEI92281
UniProt:
F7ZFU1
LinkDB
All DBs
Position
complement(247424..249178)
Genome browser
AA seq
584 aa
AA seq
DB search
MSETPHAPYQVLARKYRPETFADLVGQDAMVQTLKNAFEADRIAQAFIMTGIRGTGKTTT
ARIIAKGMNCIGPDGTSGPTTEPCGTCEHCTAIMEGRHVDVMEMDAASNTGVANIREIID
SVHYRAASARYKVYIIDEVHMLSTGAFNALLKTLEEPPEHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEVMIDLMRKIATAEGAEIAQDAMALIARAAEGSARDATSLLDQAISHGA
GETTAAQVRAMLGLADRGRVLDLFDMILRGDTAGALTELSAQYAEGADPMAVLRDLAEIT
HWVSVVKITPEAAEDPTVSPDERSRGLEMAGTLPMRVLTRLWQMLLKALDEVASAPNAMM
AAEMAIIRLTHVADMPTPEELVRKLNAADAPASGPSGGSTPTQDTATRGTTATAYASARS
PSPSGSGTVTALAEQPNEALGRFISFDHVVELIRTNRDVKLLVEVEGCVRLAQYQPGRIE
FAPTENAPADLAQRLGQRLQLWTGNRWAVTIVNDASAPTIAEKRDAAELDLQSKALAHPM
MQAVLAQFPKARITSIKTPQQIAAAAVADALPEVEDEWDPFEDS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacaccgcacgccccctatcaggttctggcacgtaaataccgccctgagacc
tttgccgatctagtcggacaggacgcgatggttcagacactgaaaaacgcgtttgaagcg
gatcgcatcgcgcaagcctttatcatgaccggcatccgcggcacgggtaaaaccaccacc
gcccggatcattgccaagggcatgaattgcatcggcccggacggcacaagcggccctaca
accgaaccctgcggcacctgtgagcattgcactgccatcatggagggccgccacgtcgat
gtgatggaaatggacgcggcgtccaataccggggtcgcaaacatccgggaaatcattgat
tccgtccactaccgcgccgcctcggcccgctacaaagtctatatcatcgacgaagtgcac
atgctgtccaccggcgcattcaacgcgctgctgaaaacgctggaagagccgccggaacat
gtaaaattcatctttgccaccacggaaatccgcaaggtccccgtaaccgtgctgtcgcgt
tgccagcggtttgacctgcgccgcatcgaacccgaggtcatgattgatctgatgcgcaaa
attgcgactgccgaaggggccgaaatcgcgcaggacgccatggccttgatcgcgcgcgcg
gctgaaggctccgcgcgggatgcgacctcgctgctggatcaggccatcagccacggcgcg
ggagagacaacagccgcgcaggtccgcgcgatgctggggctggcggatcgcgggcgcgtg
ctcgatctgtttgacatgatcctgcgcggggacactgcgggcgcgctcaccgaactgtcg
gcacaatatgccgaaggggccgacccgatggccgtgctgcgcgatctggcggagatcacc
cattgggtgtcggtggtcaagatcacccccgaagccgccgaagaccccaccgtatcgccc
gacgaacgcagccggggccttgagatggcaggcaccttgcccatgcgcgtgctgacgcgg
ctgtggcagatgctattgaaagcactcgacgaagtggcaagtgcccccaatgcaatgatg
gccgccgagatggcgatcatccggctgacacatgtggctgacatgccaacccccgaggaa
ttggtgcgcaaactgaatgcggccgatgcacctgcaagcggcccctcaggcggcagtacc
cccacacaggacacggcaacgcgcggcacaactgcgacggcctatgcctccgcaagaagc
ccatccccgtcgggttctggcaccgttacagcattggccgagcaaccgaatgaagccctt
ggccgtttcatcagctttgatcatgtggtcgaactgatccgcaccaatcgggacgtaaag
ctcttggttgaggtagaaggctgcgtgcggctggcgcaataccagcccggccggatcgaa
tttgcccccacggaaaacgcgcccgccgatctggcgcaacggctcgggcagcggctgcaa
ctctggaccggcaatcgctgggccgtcacaattgtgaatgatgcatccgcgccaacgatt
gccgaaaagcgagacgccgcagaactcgacctgcaaagcaaagcgcttgcgcacccgatg
atgcaggcggtcctcgcccagtttccgaaagcccgcatcacgtccatcaaaaccccccag
cagatcgcggcagccgccgttgcggacgctctgccagaggtcgaggacgagtgggacccc
ttcgaggacagttga
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