Roseobacter litoralis: RLO149_c003300
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Entry
RLO149_c003300 CDS
T01572
Name
(GenBank) HTH-type transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c003300
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RLO149_c003300
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF5682
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AEI92360
UniProt:
F7ZGR0
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Position
complement(341854..342738)
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AA seq
294 aa
AA seq
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MHMSEFNYHHLRYFWAVAHDGNLTRTAERLNLSQSAVSIQIKQLEAQLGHALFERRGRQL
ILTEAGRIALDHADAIFSAGRELVGTLEEQGRERQAIRIGSLATLSRNFQMEFLRPILDR
SDVDIILRSGTSADLLRALEALNLDIVLINQPPARDAVTPFVSHRLSEQPVSLVGTPARL
TGNRSLPELLSTEPVILPIADTGIRIGFDAWTERLGIRPQIAAEVDDMAMMRLLAREGVG
LAVLPPIVVQDELNSGRLIEVGQLPDIGETFYAVTITRRFPNPILSDLLKSRAL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgtctgaattcaattatcaccacttgcgatacttctgggcggtggcccatgac
ggcaatctgacccgcacggcagaacggctcaacctgtcgcaatccgccgtttccatccag
atcaagcagcttgaggcgcagcttggccatgcgctgtttgaacggcgggggcgccagttg
atcctgaccgaagcgggccggatcgcgctggatcatgcggatgcgattttttcggccgga
cgcgaattggtgggcacgctggaggaacaaggacgcgagcggcaggcgatccgcatcggg
tccctcgcaaccctgtcgcgcaattttcagatggagtttctgcgcccaattctggaccgg
tcggatgtggatatcatcctgcgctctggcaccagcgccgatctgttgcgcgcgcttgag
gcgttgaacctagatatcgtgctgatcaaccagcccccggcgcgcgatgcggtgacccca
ttcgtatcgcaccgtttgtccgaacagcccgtcagccttgtgggcacgcccgcgcggctg
accgggaaccgcagcctgcccgaactgctgagcacagagccggtcattctgcccattgca
gacaccggtattcggatcgggttcgatgcgtggacggaacgtttgggcatcagaccccag
atcgccgcagaggtcgacgatatggccatgatgcggctgctcgcgcgcgagggcgttggc
ctcgcagttctgccgccgattgtcgtgcaggatgagctgaacagcggtcggctgatcgaa
gtgggccagctgcccgatattggtgagaccttttacgcggtcacgatcacgcgccgcttt
cccaatccgatcttgagcgacctgctgaaaagccgcgcgctttga
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