Roseobacter litoralis: RLO149_c004640
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Entry
RLO149_c004640 CDS
T01572
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rli
Roseobacter litoralis
Pathway
rli00071
Fatty acid degradation
rli00280
Valine, leucine and isoleucine degradation
rli00310
Lysine degradation
rli00362
Benzoate degradation
rli00380
Tryptophan metabolism
rli00410
beta-Alanine metabolism
rli00640
Propanoate metabolism
rli00650
Butanoate metabolism
rli00907
Pinene, camphor and geraniol degradation
rli00930
Caprolactam degradation
rli01100
Metabolic pathways
rli01110
Biosynthesis of secondary metabolites
rli01120
Microbial metabolism in diverse environments
rli01200
Carbon metabolism
rli01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RLO149_c004640 (fadJ)
00650 Butanoate metabolism
RLO149_c004640 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
RLO149_c004640 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RLO149_c004640 (fadJ)
00310 Lysine degradation
RLO149_c004640 (fadJ)
00380 Tryptophan metabolism
RLO149_c004640 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RLO149_c004640 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RLO149_c004640 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RLO149_c004640 (fadJ)
00930 Caprolactam degradation
RLO149_c004640 (fadJ)
Enzymes [BR:
rli01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RLO149_c004640 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RLO149_c004640 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RLO149_c004640 (fadJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
Asparaginase
DAO
Pyr_redox_2
ApbA
2-Hacid_dh_C
F420_oxidored
NAD_Gly3P_dh_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEI92492
UniProt:
F7ZIH3
LinkDB
All DBs
Position
complement(492530..494728)
Genome browser
AA seq
732 aa
AA seq
DB search
MTDFTMDTDAAGIATITWDVKDKSMNVMTLEAWDVLDALIDQALTDDAIKGVVITSGKDS
FAGGMDLNVIARMKEMAGDDPAKGLFDGIMNAHRIMRKIERAGIDPKTLKGGKPIATVLP
GTALGIGLEIPLCTHRIFAAPNPKAKIGLPEIMVGIFPGAGGTTRLTRKMGAMAASPFLL
EGKLVDPARAKAAGLIDEVADDPMAAARDWVLNAKDADLVKPWDAKGYKMPGGAPYHPAG
FMTFVGASAMVNGKTQGVYPAAKALLSAVYEGALVPFDTALKVEARWFTNVLMNPSSSAM
IRSLFVNKEALEKGAVRPDDVADQRVKKLGVLGAGMMGAGISLVSAQAGIEVVLIDQTQE
AADRGKAYTASFADKGIARKKTTPEKKEQLLNLITATTDLDHLKDCDLIIEAVFEDPKVK
AEMTRKVEAVIPQDCIFASNTSTLPITELAKASSRPDQFIGIHFFSPVEKMLLVEIIKGK
GTGDRAVAKALDYVRQIRKTPIVVNDARFFYANRCIIPYINEGIRMVAEGVEPALIENAA
KLVGMPLGPLQLVDETSIDLGAKIARATKAAMGDAYPDAAVDEVIFWMEGENRLGRKTSA
GFYAYDEKGKRQGLWDGLAAQYPVSDTQPDLIDVQHRLLFSQTLEAVRALEEGVLMDIRE
GDVGAILGWGFAPWSGGPVSWLDMLGAAYAAERCDQLTQSFGDRFTCPDLLRDMAAKNQS
FYGRFAQKPKAA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttacaatggacacggatgccgcaggcattgcgaccatcacatgggacgtc
aaagataaatccatgaacgtcatgacgcttgaggcatgggatgtgctcgacgctttgata
gaccaggcgctgacggatgacgcaatcaagggcgtggtcatcacctcgggcaaagacagc
tttgccggtgggatggacctcaacgtgattgcacgcatgaaagagatggcaggcgatgac
ccggcaaaaggtttgtttgacgggatcatgaacgcccatcgcatcatgcgaaaaatcgaa
cgcgctggcatagaccccaagaccctgaaaggtggcaagcccattgccactgtgctgccc
ggtacagcccttggcatcgggcttgaaatcccgctgtgcacgcatcgcatctttgccgca
cccaaccccaaggccaagatcggcctgcccgagatcatggtcggtatctttcccggcgcc
ggtggcacgacccgcctgacgcgcaagatgggggcgatggccgcatcgccgttcctgctg
gaagggaaactggttgaccctgcgcgcgccaaagccgccgggttgatcgacgaagtggcg
gatgatccgatggccgctgcccgcgactgggtgttgaatgccaaggacgcggacctcgtc
aaaccatgggatgccaagggatacaagatgcccggcggcgcgccctatcatccggcgggt
ttcatgacttttgtcggggcctctgcgatggtgaacggcaagacgcaaggggtgtatccg
gcggccaaggcgttgttgtcagccgtctatgaaggcgcgcttgtgccgttcgacaccgcc
ctcaaagtagaagcccgttggttcacgaatgtgctcatgaacccatcgtcatccgcgatg
atccgttcgcttttcgtcaacaaggaagcgcttgagaaaggggcggtgcgtccggatgat
gttgcagatcaacgggttaaaaagctcggcgtgctgggcgcgggcatgatgggggctggt
atctcgctggtctctgcgcaggccgggattgaggtcgtgctgattgaccagacgcaagag
gccgcagatcgtggcaaggcctataccgccagctttgccgacaaaggcattgcgcgcaaa
aagacaacgcctgaaaagaaagaacaactgctcaacctgatcacggcgaccactgacctt
gaccacctcaaggactgtgatctgatcatcgaagccgtgttcgaagatccgaaagtcaaa
gccgaaatgacccggaaggtcgaggccgtgatcccgcaggactgtattttcgcctccaac
acctcgaccctgccgatcaccgaactggccaaagcctcatcgcgcccggatcagttcatt
ggcatccacttcttctcgcccgtcgagaaaatgctgctggtggagatcatcaagggcaag
ggtacgggcgaccgggccgtggccaaggcgttggattacgtgcgccagattcgcaaaacg
cccatcgttgtgaatgacgcgcggttcttttatgccaaccgctgcatcattccctacatc
aacgaaggcatccgcatggtcgccgagggggttgaacctgcgctgatcgaaaacgcggcc
aaactggtcggcatgccgcttggtccgctgcaactggttgatgaaacctcgattgatctg
ggcgctaaaatcgcgcgtgctaccaaggctgccatgggcgatgcctatcccgatgcggcg
gtggacgaggtgatcttctggatggagggcgaaaaccgtctgggccgcaagaccagtgcc
gggttttacgcctacgacgaaaaggggaaacgtcagggtctatgggacggtcttgccgcg
caatatcctgtatctgatacgcagcccgacctgattgacgtgcagcatcgcctgttgttt
tcgcaaacgctcgaagcggtgcgcgcgctcgaagagggcgtgttgatggacatccgcgaa
ggggacgtgggcgcgatcctcggctggggctttgcgccttggtccggcggcccggtcagc
tggctcgacatgctgggcgcggcctatgccgctgagcggtgcgatcaattgacacaaagc
ttcggagatcgtttcacctgccccgatcttttgcgcgacatggccgcgaaaaaccaaagc
ttctatggccggttcgctcagaaacccaaagctgcctga
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