Roseobacter litoralis: RLO149_c004980
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Entry
RLO149_c004980 CDS
T01572
Name
(GenBank) putative tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rli02000
]
RLO149_c004980
01504 Antimicrobial resistance genes [BR:
rli01504
]
RLO149_c004980
Transporters [BR:
rli02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RLO149_c004980
Antimicrobial resistance genes [BR:
rli01504
]
Gene variants
Tetracycline resistance genes
Transporters
RLO149_c004980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
ATG22
TRI12
Motif
Other DBs
NCBI-ProteinID:
AEI92526
UniProt:
F7ZIK7
LinkDB
All DBs
Position
complement(527199..528404)
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AA seq
401 aa
AA seq
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MKPAVVFILITMMIDAMGIGLIIPVMPDLFQEVGAGDLGTAALWGGILATAFAVMQFFFG
PVIGGLSDRFGRRPVLLVSLVVMMLDYLVMALAGSIWLLLIGRMIGGVTAATQATANAYM
ADISAPEDRAANFGLIGAAFGVGFVLGPLIGGLLAEFGTRAPFYAAAACAGLNAIFGYFV
LKETLPTSKRRPFEWRRANPFGSFRHLSKLHALGPFLIVFFLYQVAFAVYPAIWSFFGKE
RFGWEPATIGLSLALFGIMMAIVQGGLIRPVMRLLGARGTVVYGHIFDICAFLALAFVTS
GTVALILTPLAALAAVITPALQGIMSKSVGPDAQGELQGALTSLSALAMILSPLVMTGTF
AAFTGPDAPIYAPGAPFILSAGLIAIGLAIFVMRGRSASFS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccgccgtcgttttcattctcatcacaatgatgattgatgcgatgggcatcggg
ctgatcatccccgttatgcccgatctgttccaagaggttggcgcgggtgatcttggcacg
gcagccctctggggcgggatattggccactgcatttgcggtcatgcagttcttctttggg
cctgtgatcggcgggctgtctgatcgctttggacgcaggcctgtactgctggtgtcactg
gttgtgatgatgctggattaccttgtcatggcgctggccggcagcatctggctgttgctg
atcgggcgcatgatcggcggggtgacggctgcaacgcaggcaacggcgaacgcctatatg
gcggacatttctgcccccgaagaccgggccgcaaatttcggcctgatcggtgccgccttt
ggcgtcggctttgtgcttggcccgttgattggcggcctgctggcggaattcgggacccgc
gccccgttttatgccgccgccgcctgcgccgggctgaatgcaatattcggctatttcgtg
ctcaaggagacactgcccaccagcaaacggcgccctttcgagtggcgacgcgccaaccct
ttcggcagttttcgccacctcagcaagctgcacgcgctggggcctttcctgatcgtgttt
tttctctatcaggtggcattcgccgtttaccccgcgatttggtcttttttcgggaaggag
cgttttggctgggaacctgcgaccatcgggctgagccttgcgctgttcggcatcatgatg
gccatcgtgcagggcggtctgatccggcccgtcatgcgtctgctgggcgcgcgtggcacg
gtcgtgtacggccatatctttgatatctgtgcgtttttggccctcgcctttgtcaccagc
ggcaccgtcgccctcatcctgacgccgcttgccgccctcgccgcggtgatcacacccgcc
ctgcaaggtatcatgtccaaatctgtcggacccgacgcgcaaggcgaattacaaggtgca
cttacttcgctcagcgcgctggcaatgatcctgtcaccactggtcatgaccggcactttt
gcagccttcaccggtccggatgcaccaatatacgcacccggcgcacccttcattctatcg
gctggactgatcgcaatcggtctggccatttttgtgatgcgcggacgaagcgcgtcgttt
tcatga
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