Roseobacter litoralis: RLO149_c006610
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Entry
RLO149_c006610 CDS
T01572
Symbol
soxA2
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K22086
methylglutamate dehydrogenase subunit C [EC:
1.5.99.5
]
Organism
rli
Roseobacter litoralis
Pathway
rli00680
Methane metabolism
rli01100
Metabolic pathways
rli01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RLO149_c006610 (soxA2)
Enzymes [BR:
rli01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
RLO149_c006610 (soxA2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
Pyr_redox_2
FAD_binding_3
DAO
AlaDh_PNT_C
Thi4
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEI92689
UniProt:
F7ZK66
LinkDB
All DBs
Position
complement(685102..688047)
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AA seq
981 aa
AA seq
DB search
MSQINRVGGGQIDRTQILKFNFDGTQYTGHPGDTLASALLANNVRLMGRSFKYHRPRGPL
TAGSEEPNALVELRGGARQEPNTRATTTELYDGLWAKSQNRLGSLRFDLLAINDRLSNFL
TAGFYYKTFMWPAAFWEKLYEPIIRQAAGLGSLSLKADPDDYDKGFLHCDLLIIGAGPSG
LMAALTAGRSGADVILADEDFRMGGRLNSEVLSVDDQTGSDWALTTLSELASLPNVRLMP
RTTILGAFDHGIYGAVERVSDHLRTPQAGKARQVLWRIYTQNAILCGGATERPIAFDNND
RPGIMLGSAVRSYVNRFGAAPAHRIAVFTNSDEGHQTARDLTGKGIKVAAVIDTRETAPL
STDFEVIAGAQVVDTRGRLGLTFIDVQMPDGSPRVIECGALAVSGGWNPNVHMTCHHGGR
PVWNEKLAAFVPGASLPPGMTVAGAARGDLSTMGALRGGAQAAKAALGLKGRLPKLPKAE
DAEVSVTPFWYVEGASRAWLDQQNDVTVKDVKLSHQEGFRSVEHLKRYTTLGMATDQGKT
SNMGGLAIMAEMAGKSIPEVGTTMFRPPYTPVALGALAGRSVGKDFKPVRKTPSHEWAKE
RGAVFVEVGNWLRAQWFPLPHETHWRESVDREVLATRRSVGVCDVTTLGKVDVQGSDAAT
FLNKVYCNGFAKLAVGKTRYGLMLREDGIAMDDGTAGRLAEDHFVVTTTTANAVNVYRHM
EFVHQCLFPGLDVQLISTTESWAQFAVAGPNSRAVLQRIVDADYDLSNEAFPFMGCGNIT
VCGGLRARLFRISFSGELAYEIAVPTRYGDALMRRLMQVGAEYDITPYGTEALSVMRIEK
GHAAGNELNGTTTALNLGLGRMVSQAKDSIGAVLSRREGLNEPDAFRQVGIKPVNADRET
PAGAHLMAASGPVDAAHSQGYVTSACYSPNLGHHIALAFVKNGDARIGEVMRLVSPLTEY
ETQVEIVSAHFIDPDGERLRA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaatcaacagggtcggcggcggccagattgaccgcacccaaatactgaaattc
aatttcgacggcacccaatacacagggcaccccggcgatacgctggcttccgcattacta
gcaaacaatgtgcggcttatgggccggtcgtttaaatatcaccgtccgcgcggcccgctg
accgcagggtccgaggaaccaaacgcgctggtggaactgcgcggcggcgcacgtcaggaa
cccaacacgcgcgccaccacaaccgagctttacgacgggttgtgggcgaaaagccaaaac
cgccttggatcgctgcgctttgatctgctggccatcaacgatcgcctgtcaaactttctg
acagccgggttttattacaagactttcatgtggcccgccgccttttgggaaaagctctac
gagccgatcatccgacaggccgctggtcttgggtctttgtccctaaaggcagaccccgac
gattacgataaagggttcctgcattgtgaccttctgatcattggtgcgggaccctcgggg
ttgatggcggccctgaccgctggtcgatccggtgcggatgtgatccttgccgatgaagat
ttccgcatgggcgggcgcttgaacagcgaagttctcagcgtcgatgatcaaaccggcagt
gactgggccttgaccacgctgtcagagcttgcgagtctgccaaatgtgcggttgatgccc
cgcacaacgatccttggcgcatttgaccacggaatttacggcgcagttgaacgggtcagc
gatcatctgcggacaccccaagcgggtaaggcgcgtcaggttctgtggcgcatttacacg
caaaacgcgatcctctgcggtggcgcaaccgaacgcccgattgcctttgacaacaacgac
cgacccggcatcatgctgggctccgccgtgcgtagctatgtgaaccgcttcggggccgcg
ccggcgcatcggattgctgtgttcactaattcggacgaggggcatcagaccgctcgcgac
ctgacaggcaaaggtatcaaggtcgctgcagttatcgacacacgcgaaacggcccccctg
agcaccgatttcgaagtaatcgccggggcgcaggtcgtcgataccagaggtcgccttggc
ctcacctttatcgacgtgcaaatgcccgacggcagcccgcgcgtcattgaatgtggtgcc
ttggccgtgtcaggcggctggaaccccaatgtgcatatgacctgtcatcacggtggccgc
ccggtatggaatgaaaagcttgccgcatttgtaccgggcgcgtccctgccccccggcatg
acagtcgcaggtgccgcccgcggtgatctgtcgaccatgggcgcattgcgcgggggcgcg
caggcggcaaaggcagcgttgggtctgaaaggccggttgcccaaactgccaaaggccgag
gatgctgaggtgtccgtgacgccattttggtacgtagagggcgcaagccgcgcctggctc
gatcagcagaacgacgttaccgtcaaggatgtcaagctgagccatcaggaagggtttcgc
tccgttgagcacctcaagcgctacaccacgcttggcatggcaacggatcagggcaaaacc
tcgaatatgggcgggttggcgatcatggccgaaatggccggaaaatcgatccccgaagtg
gggacaacgatgttccgcccgccttacacacccgtggctctgggtgcacttgcaggtcgc
tcggttggcaaagatttcaagccggtccgcaaaacaccgagccacgaatgggccaaagag
cgcggtgcggtttttgtcgaggtgggaaactggctgcgcgcacagtggtttccgttgccg
catgaaacacattggcgcgaaagtgttgatcgtgaagtgctggcaacgcgccggtcggtc
ggggtgtgcgatgtcacgacgctgggcaaggtggatgtgcagggcagtgatgctgcgacc
tttctcaacaaggtttactgcaatggctttgccaaattggcagtgggcaaaacgcgctat
ggcttgatgctgcgcgaggatggcatcgccatggatgacggcaccgccgggcgccttgcc
gaagaccatttcgtggtgacaaccacaaccgcgaacgcggtaaacgtctatcggcacatg
gaattcgtgcatcagtgtctgttccctggtctggatgtgcaactgatttccaccaccgaa
agctgggcacagttcgccgttgccggtccaaattcccgtgcggttttgcaacgcatcgtt
gatgcggactatgacctgagcaacgaagcctttcccttcatgggctgtggcaacatcacg
gtctgcggtgggctgcgcgcacggctctttcgtatctccttcagtggggaactcgcctat
gaaatcgccgtgccgacccgctatggcgatgcgttgatgcgacgccttatgcaggtgggc
gcagaatatgacatcaccccctacggcaccgaagcgctcagcgtgatgcggatcgaaaag
ggccacgctgcggggaacgaactgaacggtaccaccacggcgctgaacctcggtctgggg
cggatggtcagtcaggcaaaagacagcatcggtgcggttctgtcgcgacgcgagggcctg
aacgagccggatgcgtttcggcaggtcgggatcaaacccgtcaacgccgacagggaaacc
ccggcaggcgcacatctgatggcggcttctggtccggtggacgcggcccacagtcagggc
tatgtcacgtcggcctgctattcaccaaaccttggccaccatatcgcattggcctttgta
aagaacggcgatgcgcgcatcggtgaagtcatgcggctggtcagcccgctgacagagtat
gaaacacaagtcgagatcgtcagcgcccatttcatagacccggacggagaacgcctgcgt
gcataa
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