Roseobacter litoralis: RLO149_c006980
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Entry
RLO149_c006980 CDS
T01572
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rli
Roseobacter litoralis
Pathway
rli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLO149_c006980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6603
OmpA
Motif
Other DBs
NCBI-ProteinID:
AEI92725
UniProt:
F7ZKQ9
LinkDB
All DBs
Position
724558..731931
Genome browser
AA seq
2457 aa
AA seq
DB search
MPFDLSLVDLFRPYILRGESTPWHAVLSVIYVESYETATGPGGMVIRGIGRFSGDVDLPT
FDPSTGTLSGAAANSEGHPRNQPDRSEPWLDVTDTKVEFSMTVPRVAGAIIADGVAGVAG
GDAAFQAVRDVLDALDAPPIDPPPSDYPNTGFTLDLILSGIEMRPPFLEPAEMRADGLLV
PHTSRRDVVFHLPKVKLRLTQGTDTNAQVQVCLVSLGASGLDDPGALSAAELVTMEPHHA
FIGSGRVVGFGFRSAYLDLSDGYTPPEVLSQFGFDEAWTGLYLPEIRIFFAPNGAEDFAV
NAGVENLLIGLGGSNGVTGDFDVAVINQGGGDLVIGANFFASDGRGIGITRTSPGNATAA
LPETTRLAVDVRGGRAPYSVTVDQGSGAQAGIVHDVSAPATGTRTITITAADASAPPKQA
TLTVSVGRRAPPAIAPPPGAPLAAILETTSITRGTQSLVAPPLALLSDNREAGGVRVSLA
GFSVPPATEWRIDGGPPTVGVTVDIDVTGGQSRAIEARTPDDAVTSLVGFFRFDTPPKVD
YTDYARVPGHIRDKEALTASKTSDWQPGARAFDVAYTDILSRINPKDVTITGTASWDGDD
SKAQYNWKLSQRRAEGLRALIEDRFPPTFTGANAPLGATHTASWRDTTWKTQGPTNRSQY
WKATITGFSVNLPGEVITGTVRRPAAPEPLPPPVVPDTPPNDPATPDWFHSARLKVRIIR
NQFVALELSGKIDFQTGLESTLQNGGATELPDDIRGIGNNPADGITDFLFLYQTDPASQT
DEVKLYIGADPADKDGLLMTGQLPGQALKPKNFGRDLLGMTTIFTPLLAESTPAQGSDGS
IAPLVASAAVVGVATGLAQAGFFNIERVILFGGEGAFRRQGDRWLMSFLFDVETAVSVNI
GFGDGDPLLEIPRDTPLAVRYKAIGLSFGVPPGGGGRFDLRPVFDSSKGYSIDVSGPGAI
RVAEPLGQILQVLGARIARTNPLSFEIDLGFAIDLGVISVDRARVRMPVDPLGPPELTAF
GAGLKVPGVLEGSGYMEFNNGDDGTEIKGGIDVRLIPVKMRIAAQIAIKQIPESAGGPAT
GVAVALEVELPVAIPLAQSGFGIYGFVGLFAMHYARDEDGITSLTPALEWLKNRANGDPT
NLQAWKTNLDSWAFGVGITLGTMGSPIIFNVKGMFLLELPGPRVLLVVKANLLAVLPELK
DKNAEGTFLCVIDLDFGRGTLTIGISIDFTIDPLVEIKIPIEAFFNLKDGKFWHVYLGSF
AGKDLQDNPLPGPIRASILGAFDGSGYVMFSGHGIPSYQPPGNNLPALSQVNGFGIAAGL
EVSIIWGNTSINLYLKVTAGFNAIIGFQPFYVGGLLYIRGELKLFIISLSASAALSAQVG
ERADGTQVSRIDGEVCGELDLFFFSIKGCVDFHLGEDSKILPPPPDLYAGAVLVSRTPAL
AEGTGVDRGIDSKIGDMPRDDNTPADADIPVVPIDAIPVISLAMPALDGGITPLGETPGG
STGAPAGGFIARGDFAYRYTMTEVTLERVGETDAVMAGNTPSTWWTLEPPDGENLTTHLS
LLNWVPNPAPKALERTEILEETIRERWGNVCEPAAPAAPVLWTFSDERLGPSADGWDLKG
TAWPDPDDAKRSRDPDVELHVHETWRSGDFALDQMRGIVPAVVEGGLVDCAPEGRDGTPN
RGGFETGRLTTGIRGGDLTGVIATSGRDLTGTLNKIDETGTSALKMRTLTRNMSLGSGTL
NKSLGDKITTTATLNTKLNRTVEREKVNRAIAGSFGTIGPVDQLSAEHLELGEAIRRVTR
GVEIERSALLSVLAGATAAGPHGTTVPGGSKVDEPKCPGRVLASPLWDTGEPVVFGDRSR
ADEVADQLASLGLKHGPLSDVIEVDSGEILSGHLLMWVNRGLLNDDQQGTGRGLVIHFLD
GDGNVLGMRPVRVSDLLTVTSLPPNWMDTNGPWFEDVYHTVLYGQMRLAPRQPVCVELAP
PDGTERFRIGVLYLDEKQAQRFEQQGRPYYVGAIELTRLSEARREAYDNIEIEKDRQVLE
DLVSGPSADVALLFPDALYRVSCKTDVRTRDDEGAESDAADQSATFWFRTDSAAPKRLDP
WILCTLPAEGEAHVFGLDAPRFVFATNSVDQLFAAYGKELRVRLKAASFRQVNEPGLPHP
VPIDAGTLEYVKAHVLSPFEAVVEDVLGESGPCVPIDENRVRHSMLTLPIPLDPYTDYVI
DIEAVDIGAPAETVGARVYRLNFSTGQFGQLEDFAGDFQATLMEHRFVQSGALQAIGNDP
RFAGRTLESILAGQDLLTTMGPELDEELIGAGLEPMDVPGAARVIVFWEQANPAADPQPA
ALLLDASEPMHRTRPIPQEVTEEDPDGIAATRWRLEPAPWLSIAESAASDDIVDKILFAP
GAQRALVTLKAGSRGKSLRMDMIRKAFDEPYLNEGFSGNVEIEIIATDLARAPWEEE
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgacctgtcactcgttgatctttttcgcccctacattttgcgcggcgaatcg
accccttggcatgcagttctatccgtcatttacgttgaaagctacgagaccgcgaccggc
cccggtggcatggtcattcgcggcatcgggcgattttccggtgatgtggacctgcccact
tttgatcccagcacaggcacgctcagcggggcggcggcgaattcggaagggcatccgaga
aatcaacccgaccgctcggaaccctggctggacgtaaccgacacaaaggtcgagttcagc
atgaccgtcccgcgcgtggcgggcgccattatcgccgacggtgtcgcgggggtggctggt
ggggatgccgcgtttcaagcggtgcgcgatgttctggatgcgcttgatgcgccaccgatt
gacccgccgccatcggactatccaaacaccggatttacgctggacctgatcctgtcaggc
attgaaatgcgcccgccctttctggagcctgccgagatgcgggcggatggattgctggtg
ccacatacatcgcgccgggacgtggtctttcacttgcccaaggtcaagctgcggctgacc
caaggaacggatacgaacgcgcaggtgcaggtgtgccttgtctcgctgggggcctctggc
cttgatgatccgggcgcgctttcggcagccgagcttgtcacgatggagccgcatcacgcc
tttatcgggtcaggccgcgtggtgggttttggctttcgctctgcatatctggacctgtcg
gatggctacacaccgcccgaagttctgtcgcagttcggatttgatgaagcctggaccggt
ctttacctgccggaaatccggattttctttgcccccaacggggctgaggatttcgccgtc
aacgcaggtgttgaaaacctgttgatcggattgggtggctccaacggggtcacgggcgat
tttgacgttgctgtcatcaatcagggcggcggcgatcttgtgatcggcgcgaacttcttt
gcaagtgacgggcgcgggattggtatcacgcgcaccagcccgggtaatgcaactgcggcc
ctgccggaaaccacgcgccttgcggtcgatgtgcgcggggggcgcgcgccttacagcgtc
accgtggatcagggcagtggggcgcaggcgggcatcgtgcatgatgtgagcgcgcccgcg
accggcacacgaaccattacaatcacggcagcagatgcaagcgcgccgcccaaacaagca
accctgaccgtttcggtcggacggcgcgcgccccccgcgattgccccaccgcccggcgca
ccgcttgcagccattctggaaaccacatccatcacgcgcggcacgcagtccttggtcgcg
cccccgctggccttgctgagtgacaaccgagaggcgggcggcgtcagggtcagtctggcg
gggttcagcgtgccgccggcgacggaatggcgcatcgacggaggccctcccacagttggt
gtgacggtggatatcgatgtgacgggcgggcaatcgcgcgcgattgaggcgcgcacgcca
gacgatgcggtgacatcgctcgtcgggtttttccgttttgatacgccaccaaaggtggat
tacaccgattatgcgcgggtgccgggacacattcgcgacaaggaagcactgaccgccagc
aaaacatcagattggcaaccgggtgcccgtgcttttgatgtggcctatacggatattcta
tcccgcattaaccccaaggacgtcaccataaccggcacggccagctgggatggggatgat
tcaaaggcgcagtataactggaagctcagccaacggcgcgccgaaggattgcgtgcactg
atcgaggaccgttttccgcccacgttcaccggagccaatgcgcccttgggcgcgacccac
acggccagttggcgcgacaccacatggaaaacccaaggccccaccaacagatcacaatat
tggaaggcgacgatcacaggcttttcggtcaacctgccgggtgaagtcatcaccggtacg
gtgcgcaggcctgcagcgcccgagccactgccgcccccggtcgtgcccgacacgccaccc
aatgatccggccaccccggattggttccattcggcgcgtctgaaagtgcgcattatccgc
aaccagtttgttgcacttgagctttcgggcaagatcgatttccagacgggtctggaaagc
acactgcaaaacgggggggcgaccgaactccccgatgacattcgcggtatcggcaacaac
cctgccgatgggattacggattttctgtttctctaccagaccgacccggccagccagacg
gatgaggtcaaactttatatcggcgcagacccggcggacaaagatggattgctgatgaca
gggcaactgcccgggcaagccctgaagcccaagaatttcggacgcgatctgttggggatg
accacgattttcacgcccttgctggcggaaagcacgccagcgcaaggctcggatggcagc
atcgcccccctcgtggcgtcagcggccgtggttggtgttgcaacaggtctggcgcaagcc
gggtttttcaacattgaaagagtgatcctgttcggcggcgagggcgcgttccggcggcag
ggggatcgctggctgatgagtttcctgttcgacgtagaaacagccgtatccgtcaatatc
gggtttggcgatggcgacccgctgctggaaattccgcgcgatacgccgcttgccgtgcgc
tataaggcgatcgggctgagctttggtgtgccgccgggtgggggtggccggtttgattta
agacctgtttttgacagctccaaaggctattccattgatgtatcgggccccggtgccatt
cgcgtggctgaaccgttgggccagatattgcaggttctgggtgcgcgcattgcccgcacg
aaccccttgagttttgagattgatctgggctttgccattgatctcggtgtgatctcggtt
gaccgggcacgggtgcgcatgccggttgatccgctgggaccgcccgaactgactgccttt
ggtgcggggttgaaggttccgggcgtgcttgaaggctccggctatatggagttcaacaac
ggggacgatggtaccgagatcaagggcgggattgatgtccgcctgatccccgtcaagatg
cggattgcagcgcaaatcgcgatcaagcagatcccggaaagcgcgggtggtcctgcaacc
ggcgtggcggtggcccttgaggttgaactgcccgtcgccattccgctggcgcaatcgggc
tttggcatttacggttttgtcggtcttttcgcgatgcattatgcacgtgatgaggacggt
atcacctcgctcaccccggcgcttgaatggctgaagaaccgcgccaacggggatcctacg
aatttacaagcctggaaaaccaaccttgacagttgggcctttggcgttgggatcacgctg
ggcacgatgggcagtccgattatctttaacgtcaaaggcatgttcctgctggagttgccc
gggccgcgtgtcctgctggtggtcaaggccaacctgctggcggtgctgcctgagctgaaa
gacaagaacgccgaagggacgttcctctgtgtcattgatctggactttgggcgcgggacg
ctgaccatcggcatttccattgacttcaccatcgacccgctggtcgagatcaaaattccg
attgaggcgtttttcaacctcaaggatggcaaattctggcacgtgtatcttggcagtttc
gcgggcaaagacctgcaggacaacccgctgccgggtccgatccgtgcgtccattctgggg
gcttttgacggctctggttacgtcatgttctcagggcatggtatcccaagctatcagccg
ccgggcaacaatctgcccgcgctgagccaggtcaatggctttgggatcgccgccgggctt
gaggtgtcgatcatctggggtaacacctcgatcaacctctacctcaaggtgacggcgggc
tttaacgcgatcattgggttccagccgttttacgtgggcgggctgctctatatccggggc
gagctgaagctgttcatcatcagcctgtcggcctctgcggcactttccgcgcaggttggt
gagcgcgcagatggcacgcaggtcagccgcatcgacggtgaggtttgcggtgagctggac
ctctttttcttttccatcaagggctgcgttgatttccacctcggcgaggattccaagata
ctgcccccgccacccgatctttatgccggggccgttctggtcagccgcacgcccgcgctg
gccgaaggcaccggggtggatcgcggcatagacagcaaaattggcgacatgccgcgcgac
gacaacacgcccgcggatgcagatatccccgtcgtaccgattgatgcgatcccggtgatc
agccttgcgatgcccgcattggacgggggtatcacgccgctgggtgagacgccgggcggc
agcaccggcgcccccgcaggtggctttatcgcgcggggcgatttcgcctatcgctataca
atgaccgaggtcacgctggagcgggtaggggaaaccgatgcggtcatggccggaaatacg
ccgtcaacatggtggacgcttgagccgccggacggtgaaaacctgaccacgcatctgtcc
ttgctgaattgggtgccaaaccctgcgcccaaagcgctggaacggacggaaattctggaa
gagaccatccgggagcggtggggcaacgtgtgtgaacccgcagcccctgcggccccggtt
ctgtggaccttttcggacgaacgtcttggcccgtcagccgatggctgggatctgaagggg
actgcatggcccgaccctgatgacgccaaacgctcccgtgatccggacgtcgagctgcat
gtgcatgaaacttggcgttcgggtgatttcgcgctcgatcagatgcgcggcatcgtcccc
gcggtcgtcgaaggaggcttggttgattgcgcgcccgagggccgcgacggaactccaaat
cgcggcggctttgaaactggtcgcctgacgacaggcatcaggggcggagatctgacaggt
gtgattgccacctcagggcgcgatctgacgggcacgctcaacaagatagatgaaaccggc
acgtccgcgctgaagatgcggacactgacgcggaatatgtccttggggtcaggcacgttg
aacaagagccttggtgacaagataacgaccacggccacgttgaacaccaaactgaaccgt
acggtggagcgcgaaaaggtaaaccgtgcgattgccggatcattcgggacaatcggcccg
gtcgatcagttatcagcagaacatctggagcttggcgaagcgatccgccgggtgacacgc
ggcgtggaaatcgagcgcagcgcactgcttagcgtgctggcgggtgccacggctgctggc
ccgcatggcacgactgtgccgggcggctcaaaggtcgatgaaccaaaatgcccgggccgt
gtgctggcctccccgctgtgggacacgggcgagccggtagtctttggagatcgcagccgt
gcagatgaggtcgcggaccagcttgcatctcttggactgaaacacggacctctttctgat
gtgattgaagtggacagcggcgaaatcctgtccggtcatttgctgatgtgggtcaaccgc
ggcctgttaaacgatgaccagcagggcacggggcgcggtctggtgatccacttccttgat
ggggatggcaatgtgcttggcatgcgcccggtgcgggtttcagacctgctgaccgtcacc
agcttgccgccgaactggatggacacaaatggcccttggttcgaggacgtgtatcacacg
gtgctctatggtcagatgcggcttgcgccacgccagcctgtttgcgttgagcttgcgcca
cctgatggcacggaacgcttccggatcggcgtactctatcttgatgaaaagcaggcgcag
cgttttgagcaacagggacgcccctattatgtgggcgcaattgagctgacccgcctgagt
gaagcgcgccgtgaagcttacgacaacattgaaattgaaaaagaccggcaggtgctcgaa
gaccttgtgagcggtcccagcgcggatgtggcactgctattcccggatgcgctttaccgc
gtgagctgtaaaacggatgtgcggacccgcgatgatgaaggtgctgagagtgatgccgcg
gatcaatcggctacattctggttccggaccgatagtgccgcacccaaacggctggatcca
tggatactatgcacgttgccggctgagggtgaggcgcatgtgttcgggttggatgcgccc
cgctttgtctttgcgacgaattcagtggatcagttgtttgcagcttatggcaaagagctg
cgcgtcaggctcaaggctgcgtctttccggcaggtgaatgagccaggattgccgcacccc
gtgcccatcgatgcaggcacgctggaatacgtgaaggcccatgtgctttccccgtttgag
gcggtggtcgaagacgttcttggcgaaagcggaccttgcgttccgattgatgaaaaccgg
gtgcggcattcaatgctgaccctgccgatcccgcttgatccttacaccgactacgtcatt
gatattgaggcggtagacattggtgcgcctgcggaaaccgtcggcgcgcgtgtctatcgg
ttgaatttctccaccggtcagttcggtcaattggaagacttcgcaggtgattttcaggcc
accttgatggagcatcgtttcgtgcaaagcggcgcgcttcaggcgatcggaaatgatccg
cgttttgccggacggacgctggagagcatccttgccggtcaggatctgttgaccacaatg
ggcccggagctggacgaggaactgattggtgccggccttgagccgatggatgtgcccggt
gcggcccgcgtcatcgtcttttgggagcaggcaaacccggcagccgatccgcaaccagcg
gcattgctgctggatgcgagtgagccgatgcatcgcacgcgaccgattccgcaggaagtc
accgaagaggaccccgatggaatcgcggccacccgctggcgccttgagcctgcgccgtgg
ttgtccatcgcggaaagcgcggcatccgatgacatcgtggacaagatcctgtttgcaccg
ggcgcacagcgtgcactcgtaacgctgaaggctggctcgcgcggcaagagcctgcggatg
gacatgatccgcaaggcttttgacgaaccttaccttaacgaaggtttttccggcaacgtc
gagatcgagatcattgcaactgacttggcccgcgccccgtgggaagaagagtag
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