Roseobacter litoralis: RLO149_c007890
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Entry
RLO149_c007890 CDS
T01572
Name
(GenBank) putative HTH-type transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c007890
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RLO149_c007890
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Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
dnstrm_HI1420
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
AEI92816
UniProt:
F7ZLF6
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Position
complement(850791..851459)
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AA seq
222 aa
AA seq
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MQQPGRPREFDPDETLSKIMHLFWEHGYEATGLSDITKATGLGKASLYAAFGNKQSMYLK
ALAHYDARVVEGAVRILRAPDTAPLARIDAFLSAPLTALGDHADSRGCFLCNASADRAAL
DAQTATLVRTGYDKMRRAIVHALSQARPDMAQNARDQQAQLILTVYSGLRIMARSAKTLE
TLKPAKNAVMEILRNKPALRTLPKAHLGGLRTLSADPNRGPL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacccggacgcccgagggaatttgaccccgatgagaccctgtcgaaaatcatg
catctgttctgggaacacggctatgaggcgacggggctgagcgacatcacaaaggccacg
gggctgggcaaggcgagcctttatgcggcgtttggcaacaagcagtcgatgtatctcaag
gcgcttgcgcattacgacgcccgggtggtggagggggcggtgcgcatcctgcgcgcgcct
gacacggccccgctggcgcggatcgatgcgtttctcagcgcgccgctcacggccctgggc
gatcacgccgacagccgcggctgtttcctgtgcaacgcctccgcggatcgcgccgcgctg
gacgcgcaaacggcaaccctcgtgcgcacaggctatgacaagatgcgccgcgccatcgtc
catgccctgtcacaggcacgcccggacatggcccagaatgcgcgcgaccaacaggcgcaa
ctgatcctcaccgtctactccggcctgcgcatcatggcccgatccgccaaaaccctagaa
accctcaaacccgcaaaaaacgccgtcatggaaatcttgcgcaacaagccggctttacga
accctccccaaagcacacttggggggattgcggacgctaagcgccgaccctaatcggggg
ccactataa
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