Roseobacter litoralis: RLO149_c011330
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Entry
RLO149_c011330 CDS
T01572
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rli03009
]
RLO149_c011330
Enzymes [BR:
rli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RLO149_c011330
Ribosome biogenesis [BR:
rli03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RLO149_c011330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AEI93137
UniProt:
F7ZBU5
LinkDB
All DBs
Position
complement(1173780..1174637)
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AA seq
285 aa
AA seq
DB search
MTSEPTPQGDRIAKVLSRAGVASRREAERMIEAGRVKVNGQHISSPALNVQGTDKITVDG
KEVSPPEPARLWLYHKPTGLVTTDNDEKGRETIYSALPEDMPRVMSVGRLDINSEGLLLL
TNDGGVKRRLELPTTGWLRRYRVRINGRPTDATLDPLRRGISSEGENFQPMQITLDRQQG
ANAWLTVGLREGKNREIRRALAELDLSVNRLIRISYGPFQLGELKPGAVEEVRRKILRDQ
LGLEGEVEESAPKHPDAGKKRGPNVNRTRTAAPGKSFKHTKKPRK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaacccacgccgcagggcgaccgcattgccaaagtcctcagccgcgcaggt
gttgccagtcgccgcgaggcggagcgtatgatcgaggccggccgcgtcaaggtgaacgga
cagcatatttcatccccggcactgaatgttcagggcaccgacaagatcacggtggatggc
aaagaagtgtcaccaccagaacccgcacggctttggctttaccacaaacccacgggcctc
gtgaccaccgacaacgatgaaaagggccgcgaaacaatttacagcgccttgccggaggat
atgccccgtgtgatgagcgtcgggcggctcgatatcaattccgaagggctgttgctgctg
accaatgatggcggggtcaaacgtcgccttgaactgcccacgacgggatggctgcgccga
taccgcgtgcgtatcaatggcagaccaactgatgcgacgctggacccgctgcggcgcggg
atcagcagcgagggtgaaaattttcaacccatgcagatcacgctggaccgccagcaaggt
gcaaatgcatggctgaccgtggggctgcgcgagggtaaaaaccgcgaaattcgccgcgca
ttggcggaactggacctatccgtgaaccgcctgatccggatcagctatggtccttttcaa
ctcggggaattgaagcccggcgcggttgaagaggtgcggcgcaagatcctgcgtgaccaa
ttgggccttgagggcgaggttgaggagagcgcaccaaaacacccggatgctggcaaaaaa
cgggggccaaatgtgaatcggacgcgcacagcagccccgggcaaatcattcaaacacacc
aaaaaaccgcgtaaatga
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