Roseobacter litoralis: RLO149_c013460
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Entry
RLO149_c013460 CDS
T01572
Name
(GenBank) putative transcriptional repressor
Organism
rli
Roseobacter litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_24
MarR
HTH_5
TrmB
HTH_27
HTH_AsnC-type
HTH_11
HTH_28
HTH_20
HTH_Crp_2
TFIIE_alpha
DprA_WH
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEI93348
UniProt:
F7ZE27
LinkDB
All DBs
Position
1391080..1392288
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AA seq
402 aa
AA seq
DB search
MTQSPVIRALNHGANQKGLRDYNERLILSVLHRHGDLPGSEIARKTKLSAQTVSVILRKL
EGDGLVTKGRPSKGRVGKPSVPMALNPKGAISVGCKLGRRGSDVLLTDLNGQILFRKHIQ
YDLALPHEVFAFFRDAFSDGVGHIGPELAGKLCGIGIAAPFEIWKWGASDGNTPEEFLSW
KDVSFESEVAQFTDLPLYMVNDATSACWAEQIYGRGKAMDNFAYFFVSTFIGGGIVLGNS
VYEGKLGNAGAFGPLRVGNKAGQTRQLLDVASLHVLETRLTQTGHDPKQLWSQPQDWDKF
STHVAPWIDETAHGIAQACISACSVIDFESVLIDGYFPDWVRSALVEAVAAYVGKEDSRG
LILPNILAGQVGSEARGIGAACVPVFSQYFLVSKPMVSNGHF
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtcacctgtcatcagggcgttgaatcacggggccaatcaaaaggggctgcgc
gattacaacgagcgattgatactgtcggtattgcatcgccacggggatttgccaggcagc
gagattgcccgaaagacaaagctctcggcgcaaacagtctccgttattctgcgcaaactt
gagggtgacggtttggtcaccaagggacgtccctccaaggggcgcgtgggtaaaccatct
gttccgatggcgttgaatccaaagggtgcaatttcagttggatgtaaattgggtcgacgc
ggcagtgatgtgttgctgaccgacctgaacgggcagatcttgttcagaaaacacatccag
tatgatctggccttgccgcatgaggtgtttgcgttcttccgggatgcattttctgatggg
gtgggacacatcggcccggaacttgccggcaaactctgtggtattgggatcgccgccccg
tttgaaatctggaaatggggcgcttcggacggcaatacgcccgaggagtttctgtcgtgg
aaagatgtatcttttgaaagcgaagtggcgcaattcaccgatttgccgctttacatggtg
aatgacgcgaccagcgcgtgctgggccgaacaaatctatggtcgtggcaaggccatggac
aatttcgcctactttttcgtgtcgactttcatcggtggtggcatcgtgcttggaaattcg
gtctatgaaggcaagctgggaaatgcgggggcgtttgggccacttcgggtcggtaataag
gccgggcagacgcggcagctgctggatgtggcctcccttcatgtccttgaaacacggctg
acacaaacgggccacgatcctaaacagctctggtcgcagcctcaggactgggataaattc
agcacgcacgtcgctccctggatagatgagaccgcacatggcatcgcgcaggcctgcatt
tcagcctgttcggttatcgattttgaatctgttttgatcgacggttattttccggactgg
gtgcgcagcgcgttggttgaggccgtcgcggcttatgtaggcaaagaagatagccgaggt
cttattcttccgaacatacttgcggggcaggtcggtagcgaggcgcgcggcatcggtgct
gcatgcgtcccagtgttctctcagtattttctggtttcaaaacccatggtgtcgaacggc
cacttttga
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