Roseobacter litoralis: RLO149_c015760
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Entry
RLO149_c015760 CDS
T01572
Symbol
rafA
Name
(GenBank) alpha-galactosidase RafA
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
rli
Roseobacter litoralis
Pathway
rli00052
Galactose metabolism
rli00561
Glycerolipid metabolism
rli00600
Sphingolipid metabolism
rli01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RLO149_c015760 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
RLO149_c015760 (rafA)
00600 Sphingolipid metabolism
RLO149_c015760 (rafA)
Enzymes [BR:
rli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
RLO149_c015760 (rafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
GHL10
Glyco_hydro_31_2nd
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
AEI93571
UniProt:
F7ZG31
LinkDB
All DBs
Position
complement(1626712..1628796)
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AA seq
694 aa
AA seq
DB search
MTECWRLDDARQTLALASTNGRCPQVIYWGAPLPPGEDLCALSDVSTLDVTGGMLDQNPD
LSLCPEAARSFPGQPGLIVRDRDGTPFLPKFRLDHVTQSELTLTVTCVDAANQLTYVAEF
TLDADTHVIAMTARLSADRPLHLHWLAAPVLPAPQHSEEMIDFAGRWCGEFQMNRTAWSP
GIRYRENRTGRTGHEHFPGLVVPCKGATNTAGEAYAFHYGWSGGHRMIAEELPDGRRQIQ
FGHAARMETAAATEFRTAPLYAVYSCDGLNGCAVSFQRHVRDRIVSWTETGRPRPVHYNC
WEAVYFKHDLPVLKDIATRAAALGAERFVLDDGWFGQRDDDTSSLSDWEVDPRKYPDGLG
PLIDFIHAQDMSFGIWFEPEMINPNSNIHRAHPHWALGAEDQILGRQQKALNMALPEVRD
FLYQRISALLSAHPIDYIKWDHNRVLPMPDAAQTRGSYALMDRLRADFPHVEIESCASGG
GRIDFGILHRTQRVWLSDSNDALERLKMQHNAALFLPSCVTGSHVGPRKCHTSGRILDIE
FRAWVAAQRHMGFEMDPRELTDEEADVLRDVSQWWKNNRDWMDTGDILRLDAADPSVIAE
QQLARNGGQFVVFVGKSGTSDQIAPRPLRLTRLEPEARYEVSLRNRKAASHLSRGSLALK
DGPVTLSGAALMQNGLTLPWSFPESMWVLEGRRL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagtgctggcggctggatgacgcgcgccagacgctggcgcttgcctcgacaaat
gggcggtgcccgcaggtcatttactggggcgcgcccctgccaccgggcgaagacctgtgc
gcgctcagcgatgtcagcacgctcgatgtgacgggtggcatgctggatcagaacccggat
ctgtcgctctgccctgaggctgcacgcagcttcccgggccagcccggtctcattgtgcgt
gaccgggacggcacgcctttcctgccgaaattccggctggatcacgtgacgcagtccgag
ctgaccttgaccgtgacctgcgtcgacgcggccaaccaactgacctatgtggcggaattt
acgctcgatgccgacacccatgtgatcgccatgacagcacggctatctgctgaccgaccg
ctgcatctgcactggctggccgcccctgtcctgcccgccccgcaacatagcgaggagatg
attgatttcgcaggccgctggtgtggtgaattccagatgaaccgcaccgcatggtcgccg
ggcatccgctaccgcgaaaaccgcacggggcgcaccggccacgagcattttcccggtctg
gtcgttccctgcaagggggcgaccaataccgcaggtgaggcttatgcctttcactacggc
tggtccggcgggcaccggatgatcgccgaagaattgcccgatggccggcgccagatccag
ttcggccacgccgcccgcatggaaacggctgccgccactgaattccgtaccgccccgctt
tatgcggtctattcctgcgacggtctcaacggctgcgcggtctcctttcaacgccatgtg
cgcgaccggatcgtcagctggaccgagacgggccgcccgcgcccggtgcattataactgc
tgggaagcggtctatttcaaacacgacctgccggtgctcaaggacatcgccacacgggcc
gccgcccttggtgcggagcgtttcgtgctggatgatggctggttcgggcagcgcgacgat
gacacctcgtcgctgtcggactgggaagtggacccgcgcaaatacccggacgggttgggg
ccgctgatcgattttatacatgcacaagacatgagttttggcatctggttcgagccggaa
atgatcaatccgaattccaacatccaccgcgcccatccccattgggcgttgggggcagag
gatcaaatccttggccgtcagcaaaaggcgctcaacatggccttgccggaggtgcgcgat
ttcctctatcagcgcatatctgcgctgctctctgctcaccccatcgactacatcaaatgg
gaccacaaccgggtcttgcccatgcccgatgcggcccagacccgcggctcctatgcgctg
atggatcggctgcgcgccgattttccgcatgtggaaattgaaagctgcgcttcgggtggc
gggcggattgatttcggcatcctgcaccgcacgcaaagggtctggttgtccgatagcaat
gatgcgctggaacggctgaagatgcagcacaacgccgcgctttttttaccttcctgcgtc
accggcagccatgtggggccgcgcaaatgccatacctcgggccgtatattagacattgaa
ttccgcgcttgggtggcggcacaacgccatatggggtttgagatggacccgcgcgagttg
accgacgaggaagcagacgttctgcgtgatgtttcccagtggtggaagaacaaccgcgac
tggatggacacaggcgatatcctgcggctggatgcggcggacccgtcggtcattgccgaa
cagcaacttgcccggaacggcggccaattcgtggtctttgtcggtaaatccggcacgtcg
gatcagatcgccccgcgccctttgcgcctgacccggctggagccagaggcgcgttacgag
gtcagcctgcgcaatcgcaaggccgcatcgcatctgtcgcggggctctttggccctcaag
gacggccctgtcacgctgagcggggcagccctgatgcaaaacggcctcacgctgccatgg
agttttcccgaatccatgtgggtgctggagggccgccgcctgtga
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