Roseobacter litoralis: RLO149_c019360
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Entry
RLO149_c019360 CDS
T01572
Symbol
yjgR
Name
(GenBank) hypothetical protein DUF853
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c019360 (yjgR)
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RLO149_c019360 (yjgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_10
AAA_30
TrwB_AAD_bind
nSTAND3
T2SSE
CbiA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AEI93922
UniProt:
F7ZKA3
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Position
complement(1985780..1987351)
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AA seq
523 aa
AA seq
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MIGKSSVTSDIFIGGGGPEYATQQFLKLDYANRHGLIAGATGTGKTVTLQILAEGFANAG
VPVFLSDVKGDLSGLAKAGSPTHKLHAPFSERAAKIGFANFSYDAFPVTFWDVFGDQGHP
VRTTVSEMGPLLLSRLLNLTEAQEGIINIAFRLADEEGLPLLDLKDLQSLLVWIGENAKT
LALRYGNVSSSSIGAIQRRLLVLENQGGTGLFGEPALQLSDLMRRDSQGRGQINILAADK
LMGAPALYATFLLWLLSELFEELPEVGDPDKPKLVFFFDEAHLLFDDAPKALVDKVEQVA
RLIRSKGVGVYFITQNPADVPEDILGQLGNRIQHALRAFTAKDKKELRMAADTYRENPEF
DTEIAIREVGVGEAVTSMLEKKGVPGVVERTLIRPPSSHLGPISATERADIMAQSDMAAR
YNKTVDRKSAYEILKQRADAASQEAEHSEDLAEQASALEREFNAARRYSGQRVARSTSRR
STRARKQPETIGSALTNAVLKELSGTTGRRMVRGILGSLFKGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgattggaaaaagcagcgtgacatcagatattttcatcggtggtggcggtccggaatat
gcgacccaacaatttctgaaactcgattacgccaatcggcatggcctcattgccggggcg
acgggaacggggaaaaccgtaactttgcaaattctggctgaggggtttgcaaatgccgga
gtccctgtatttctatcggatgttaagggtgatttgtccgggttggccaaagcaggcagc
cccacgcataagctacacgcgcccttcagtgaacgggctgcaaagatagggtttgcaaac
ttttcctatgacgcgtttccggtcacgttctgggatgttttcggagatcaagggcacccc
gtgcgcacaaccgtgtcagagatggggccgctgctattgtcacgcctgctcaatctgact
gaggcgcaggagggtatcatcaatatcgccttccggctcgcagatgaggaagggttgccg
ctgcttgatctgaaggatttgcagtctttgctggtctggatcggtgaaaatgccaaaacc
ttggccttgcgatatggcaatgtctcttcaagttctatcggggcgattcagcgtcgtttg
ttggtgctggaaaaccaaggtggcaccggcctctttggggaacctgcgctgcagctttcc
gacctgatgcgcagggattcgcaggggcgcgggcagatcaacattcttgccgcagacaag
ctgatgggggccccagcgctttacgcaaccttcctgctgtggttgctttcagaactcttt
gaagaactgcctgaagtgggggatcccgacaaacccaaactggtgtttttctttgacgag
gcgcatctgcttttcgatgatgcccccaaagcgttggtggataaggttgagcaggtcgcg
cggctgatccggtccaaaggggtcggtgtctatttcatcacccagaaccccgcagatgtg
cccgaagacatcctcgggcaacttggcaaccgtatccagcatgcgctgcgtgccttcacg
gccaaggacaagaaagagctgcggatggcggcggatacctatcgtgagaatcctgaattc
gacacggaaatcgcaatccgtgaagtcggggtcggcgaagccgtgacgtcaatgcttgag
aagaaaggtgtgcccggcgtcgttgagcggacgttgatccgccccccgtcatcccatctt
ggaccaatctccgctactgagcgggctgacatcatggcgcaatcagatatggcggcgcgt
tataataagacggttgatcgcaagtcagcctatgaaatcctgaaacagcgcgcggatgcg
gcatcgcaggaagcggaacactctgaagacctggcggaacaggcctcggcgctagagcgc
gaattcaacgccgcgcggcgctacagtggtcagcgggttgcccgatcaacatcgcggcgc
agcacccgcgcgcgcaagcaacctgaaacaattggttcagccctcaccaatgccgtgctc
aaggagttaagcgggacaacgggtcgtcggatggtgcgcggtattctcggcagtctgttc
aaagggcgctag
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