Roseobacter litoralis: RLO149_c020890
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Entry
RLO149_c020890 CDS
T01572
Name
(GenBank) putative HTH-type transcriptional regulator, IclR family
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c020890
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RLO149_c020890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_20
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEI94065
UniProt:
F7ZLL4
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Position
2138606..2139388
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AA seq
260 aa
AA seq
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MAGRGLTAVEVQKATGLPRPTCYRLLQTLAENRLIDDPERSSRYVIGERLIGIALLGQSD
IDVRRVCAPVLREAALNLEDSVFLARLRSSDVEIIHVETPSNSTRGFIHPGFGVRPMHAC
SCSKAIAAFAKESFQENILSGMFNVYTPHTKTMRAQLETEFAAIVQQGYAECHEEIDIGV
SSVAAPVLVGKIGTTFSVGAVGPVRRFTKQYRKRLGEDLIAISAKLGAAIQLCAVSQDRI
AEMPGPTEPQQKAKQLPNHH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccgtggcctcacggcggttgaggtgcagaaagcgactggattgccaaggcca
acgtgctatcggctattgcagaccctcgctgaaaacaggttgatcgacgatccggagagg
tcttcgcgctatgtgatcggtgaacgtttgatcgggatcgcattgcttgggcaatctgac
atcgacgtccggcgtgtctgcgcgcctgtgctgcgtgaagctgcgttgaaccttgaagac
agcgtgtttcttgcacggttgcgcagcagcgatgttgaaatcatccacgtcgagaccccg
agcaactccacacgcggtttcatccatcccgggtttggcgtccgcccgatgcacgcctgc
tcctgctccaaggcgattgccgcctttgccaaggagagctttcaggaaaacatactctcg
ggtatgttcaacgtttacacgccgcacacaaaaacaatgcgggcacagctcgaaacggag
tttgccgccatcgtgcagcagggctatgccgaatgccacgaggaaatcgacatcggtgtt
tccagcgtcgcggcccccgtgctcgtgggcaagattggcacgacattcagcgtgggcgct
gtcggccctgtgcgccgcttcacaaagcaataccgcaagaggttgggcgaagacctcatc
gccatttctgcaaaactcggtgccgcgatccagctttgtgctgtatctcaggaccggatt
gcagaaatgccaggaccaacagaaccacaacagaaggcaaaacaactgccaaaccaccac
taa
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