Roseobacter litoralis: RLO149_c021680
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Entry
RLO149_c021680 CDS
T01572
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rli02000
]
RLO149_c021680
Transporters [BR:
rli02000
]
Other transporters
Pores ion channels [TC:
1
]
RLO149_c021680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AEI94144
UniProt:
F7Z9Z1
LinkDB
All DBs
Position
complement(2210258..2213875)
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AA seq
1205 aa
AA seq
DB search
MRYLLIIAVTLTLLPLSLAAQDDEDGGGFLTRTIEGALSGAGREVNIVGFAGALSSEATF
DTMTIADAEGIWLTLEEVSLIWSRTALLRGRLKVDSLTARSLQVARLPIAEEQPVEIPSA
EAEEFSLQLPELPVSINIDAFEVSEIDLGEPILGAAARLSLKASARLDDEGLFLDLVADR
IDEVAGTFALRTNVERDGAEIDLNLTLSEAADGITAKLLNLPDRPSVDLSVAGIGPLDDF
TADIALSTAGQPRLAGQVALRAEESAIVDAGPDRRIRADLGGDITSLIAPEYHDFFGPDV
ALKVETLLVADGSIDVQNFSIGAQAVDLTGRVQLNSDMWPSFVDVKGLIAQDGQDVVLPG
SDAGITVGSIGLDISFDAQAGDAFKGVFDIDNLQHEAAQVASIDLILDGTLDGSVDSIGR
FVTDLRLDATGVELSDESTAQALGDAINGFATINYVEGQPIEITNLSLSGPDFGLDGDVE
IEGLDNGFPTNFDLAVVTQDLSRFAGLAGRPLSGAADLSVAGRVVPLSSMFDVKIAGTAQ
DIIVDIPQADALLTGRTELSLGAARDATGTFVRDLSLQNDALDVTADAALRSMGSEVVAR
VRLSDVALIAPQYQGPLSLDADAKQSQEGWQIEAALDAPYDARAVVSGLATGPDADLSFD
VSIPEIQPLVPDAQGPVAAKGRLWQSAAGYQIDVKADVPFDGRLEVLGLATGPDAKVTFD
ASLPDMSVLVPDIGGPLALKGDLARAGEGWAVDTLLEGPAGMTATIAGTAAQDASTVDLE
IDGELPLGLAGPFLAPRSLQGQAVFDLAVQGAPSLEALSGQISSSGARFSDPNLRLGLEN
LNTRIDLLSNTAQLNLGADFVTGGRAEVGGSVNLASLIGDLTVALRDAVLLDPNLYAATV
GADITVNGPLTGGARIAGQIDLKEVNITVPGTGVTSIGSIPEIRHVGATRRATVTQSYAG
VLPKEEKEERADAPAFPLAIDINAPSKLFVRGRGINAEMGGALSVRGDTNNIISSGSFDL
IRGRLDIIGKRFELDEGSIQFQGSVTPYIRFVTTTDTPEGTASITVDGLADEPEITFSAI
PEAPEDEVMSLILFGRYVSELSAFQALQLANGISQLSGRGGINVLGGLRSGAGLDELDVT
TDEDGATSVSAGKYITDTIYTDVTNNSDKGTDISLNIDLTSDLKGKATVAEDGDSSVGFF
FERDY
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgagatatctgctgatcattgctgtcacactgacgctgttgccgctgtcgctcgcggca
caggatgacgaagacggtggtggctttttgacacgcaccattgagggcgcgttatcgggt
gctgggcgtgaggtgaacatcgtcggctttgccggtgcgctgagttcggaggcgacattc
gacaccatgacgattgccgatgccgagggcatctggctgacgctggaagaggtatcgctg
atctggagccgcaccgccttgctgcgcggacgcctcaaggtcgacagcctgactgcacgg
tccctgcaagtggcacgcctgcccatcgccgaagagcaacccgtcgagataccgtccgcc
gaggccgaagaattcagtctgcaactgcctgaactgccggtgtccatcaatatcgacgcg
tttgaagtgtcagaaattgaccttggagaacccattcttggcgcggcggcgcgcctgtcc
ttgaaagcgagcgcgcgtctggatgatgaggggttgtttctggacctagtggccgaccgt
atcgacgaggtcgcaggcacattcgccctgcgcacaaacgtcgaacgtgacggcgctgag
attgatctgaacctgacactgtcagaggcggcggatggcattacggcgaaattgctcaac
ctgcctgatcgaccctcggttgacctcagtgtcgccggtattggtccgttggatgatttc
accgccgatatagctttgtcgactgcggggcagccgcgtctcgccgggcaggtggcgttg
cgcgccgaagaaagtgccatcgtcgatgcgggacctgatcgccggatacgtgctgatctt
ggcggcgacatcacatctctgatcgcgcccgagtatcatgacttctttggtcctgatgtt
gcgctgaaggtcgaaacactgctggtggccgacggttcaattgatgttcagaactttagc
atcggcgcgcaggctgttgatctgacaggtagagttcaattgaatagtgatatgtggcca
agctttgtcgatgtcaaaggcctgatcgcgcaggatggacaagacgttgtcttgcccggc
tcagatgcgggtattacggttggatctattggtcttgatatatccttcgacgcgcaggcg
ggcgatgcgttcaagggtgtttttgacatcgataatctgcagcatgaggccgcacaggtt
gccagcattgacctcatccttgatggcactttggatggcagtgtggacagtatcggtcgt
tttgtgacggatctgcgtctggatgcaaccggtgtggaacttagcgatgagagcacggcg
caggctctgggcgatgcaatcaacggctttgccaccatcaactatgtcgaaggccagcca
atcgagattacgaacctgtccctgtcgggtcccgatttcgggctggacggcgatgttgag
atcgaagggttggacaatggctttccgacaaactttgatctagctgtggtgacgcaggat
ttatcgcgctttgcagggcttgcagggcggcccctgagcggtgctgccgatttatcggtg
gccgggcgcgttgtcccgctgtccagcatgtttgatgtcaagatcgcaggaacggcgcag
gatattatcgtagatattccccaagctgacgcgttgctgacaggacgcaccgaactctct
cttggtgcggcgcgcgacgccacggggacttttgtgcgggacttgtcgctgcagaacgat
gcgttggatgtgacagcggatgcggcgctgcgcagcatgggcagtgaggtggtagcgcgc
gtcaggctatcggatgtcgcccttatcgcgccgcagtatcaggggcctttgtcgctcgac
gctgatgcgaaacagtcacaagagggatggcagatcgaggccgcgctcgatgcgccctac
gatgcgcgcgctgttgtttcggggctggcgaccgggccggatgctgatctgagttttgac
gtctcgatcccggaaattcagccccttgtcccggatgcacaaggtccggttgccgctaag
gggcggctttggcagtcggctgcaggctatcagatcgacgtcaaagcggacgtacccttt
gacggacggcttgaggttctgggcctcgccaccgggcccgatgcgaaagtcacctttgac
gcgagcttgcccgatatgagcgtgctggtgcctgacattggtggccccctcgcgctgaag
ggggatttggcgcgcgcgggcgaaggttgggccgtcgacacgctgcttgaggggcctgcc
ggaatgaccgcaacaattgccggcaccgcagcacaggatgcaagcacggttgatctcgag
attgacggtgaattaccactcggactcgcgggtccgtttctggcaccccgcagtctgcaa
gggcaggcggtatttgacctcgccgttcaaggtgcgccgtcgcttgaggctctgagcggg
caaatctccagtagcggtgcgcggttttcggacccgaacctgcgtcttggcctcgaaaat
ctgaacacgcgcatcgatttgctcagcaacacggcgcaactgaatttgggggcggatttc
gtgacgggggggcgggctgaggtcggcggctctgtcaatctggccagtctgattggcgat
ctcacggtggccctgcgcgatgctgttctgcttgatccgaatttgtacgcagccactgta
ggcgcagatatcaccgtgaacggtcccttgacgggtggtgcacggattgcagggcagatt
gatctgaaagaggtcaatataaccgtgccgggcacgggggtcacatccattggctccatc
cccgaaattcgccatgttggtgcaacgcgccgcgccacggtaacccagtcctatgcgggg
gttttgccaaaggaagaaaaagaggaaagggccgatgccccggcatttccactggccatc
gacatcaatgccccctcgaaactctttgtgcgtgggcgcggcataaatgccgaaatgggc
ggcgctctttctgtgcgcggggataccaataacatcatctcgtcaggcagctttgatctg
atccgtggtcgcctggacattatcggcaagcgttttgaactggatgaagggtccatccag
tttcagggcagtgtcacaccctacattcgctttgtcacaaccactgacacccccgagggc
acggccagcatcaccgtagatggtctcgccgatgagccggaaatcaccttcagcgccata
ccggaggccccggaagacgaagtgatgtcgctgatcctgttcgggcggtatgtatccgaa
ctttcggcgttccaggctttgcagttggcgaatggtatctctcaactgtctggccgtggc
ggcatcaacgtgcttggcggtttgcgaagcggtgcgggactggatgagctggacgtcacg
accgatgaggatggtgcaacctccgtgtcggcggggaaatacatcacggatacgatttat
acggatgtaacgaacaacagcgacaagggcaccgatatttcgctgaatatcgatctgacc
agcgatctcaaaggcaaggcgaccgtggccgaagacggcgacagcagtgtgggtttcttt
ttcgaacgggactattaa
DBGET
integrated database retrieval system