Roseobacter litoralis: RLO149_c022300
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Entry
RLO149_c022300 CDS
T01572
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c022300 (phrB)
Enzymes [BR:
rli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RLO149_c022300 (phrB)
DNA repair and recombination proteins [BR:
rli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RLO149_c022300 (phrB)
Prokaryotic type
RLO149_c022300 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEI94205
UniProt:
F7ZA52
LinkDB
All DBs
Position
complement(2283330..2284748)
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AA seq
472 aa
AA seq
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MSTSPVLVWFRRDLRLSDHPALNAAVKSGNPVIPVFIHDDQVETLGAAPKWRLGLGIDHL
SETLEGLNSRLILRRGPALETLRTLVQETGAGAVFWTRLYDPAAVDRDTELKAALKQDGI
DARSFGGHLMFEPWTVETKTGGFYKVYTPFWNMVKNRDVDAPLSAPAKIPAPDAWPSSEA
LSDWNMGAAMDRGAAVVAPYVRLGEAAAQTRLSTFIDKIVARYDTTRDQPAVDGTSGLSE
NLALGEISPHQCWHAGLRARQEGKPGAETFLKELVWREFAYHLMHHTPRILTDNWKEGWD
SFPWNRDETTEAVMRWQQGRTGIQFVDAAMRELYVTGRMHNRGRMIVASYLTKHLLSDWK
IGLKWFEGCLIDWDPASNAMGWQWSAGSGPDATPYFRVFNPVTQLDKFDKDRQYVKRWIA
QGRRAPSETALSFYDAIPRAWGLSGDQEYPAPVVAADEGRKRALEAYENRGF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacatctcccgttttggtctggttccggcgcgatctgcgtctgagcgatcacccc
gcattgaacgctgccgtcaaatctggcaatccggtcattcccgtattcatccacgacgat
caggttgagacgcttggtgcggcacccaaatggcgtctcggtcttgggatcgaccatctg
tcagaaacgctggagggcctcaacagccgcttgatcctgaggcgcggtccggcgcttgaa
acgctccgaacgctcgttcaagagacgggggcaggggccgtgttctggacacgcctctat
gacccggctgcggtggaccgcgacaccgaactcaaggcggcactcaagcaggacggcatc
gatgcgcgctctttcggggggcacctgatgtttgaaccctggaccgtggaaaccaagacg
ggcgggttttacaaagtctatacgcccttctggaacatggtcaaaaaccgcgatgttgac
gcgcccctgtcggcaccggcaaagatcccggcacccgacgcgtggccaagcagcgaagcg
ctcagcgattggaacatgggcgctgcgatggatcgtggcgcggcagtggttgcaccctac
gtccggctgggggaggccgccgcacaaacgcgcctcagcacttttatcgacaagattgtt
gcacgctatgacacaacccgcgatcagcctgccgtcgatggcacatcggggctgtcggaa
aacctcgcccttggagaaataagcccgcatcaatgctggcacgccgggctgcgcgcgcgc
caagaggggaaacccggcgctgagacgttcctaaaggaactggtctggcgcgaatttgcc
tatcacctgatgcaccacacgccgcgcattctgacggacaactggaaagagggctgggat
agtttcccttggaaccgggatgaaacgaccgaggccgtcatgcgctggcaacaggggcgc
acgggtatccagtttgtggatgccgccatgcgagagctttatgtgacgggcaggatgcac
aaccggggtcgcatgattgtggcgagttacctgaccaaacatctcctgagcgattggaag
atcggattgaaatggttcgagggctgtctgatcgactgggacccggccagtaacgcaatg
ggctggcagtggtctgcaggttctggccccgacgcgacgccctattttagagtgttcaac
cccgtgacacagctggataagttcgacaaggaccgccaatacgtaaagcgttggatcgcg
caggggcggcgtgcgccctcagaaaccgcgctgtcgttttatgatgcaatcccgcgcgca
tggggtctgagcggcgatcaggaatatcccgccccggttgtggcggcagatgagggccgt
aaacgtgctttggaagcctatgaaaatagagggttttaa
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