Roseobacter litoralis: RLO149_c023100
Help
Entry
RLO149_c023100 CDS
T01572
Symbol
rhaT
Name
(GenBank) rhamnose ABC transporter, ATP-binding protein RhaT
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
rli
Roseobacter litoralis
Pathway
rli02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RLO149_c023100 (rhaT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rli02000
]
RLO149_c023100 (rhaT)
Transporters [BR:
rli02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RLO149_c023100 (rhaT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
AAA_29
RsgA_GTPase
AAA_23
MukB
AAA_30
AAA_15
AAA_19
TPR_NPHP3
DPOA2_OB
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AEI94280
UniProt:
F7ZAT4
LinkDB
All DBs
Position
complement(2363218..2364753)
Genome browser
AA seq
511 aa
AA seq
DB search
MSKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTG
IYQPDGGTIRIAGAPVILNTPNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGL
IDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAIARALSVDARVVIMDEPTAAL
SHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
LVKMMVGRAVDHIFPERQAALGEEVLQVTGYAHPTEFAGIGFTLKRGEILGFYGLVGAGR
SELMQALFGITRPSKGVTKINGDIRVIRSPADAVNNGIVYVPEDRGKQGAVIGLPIFQNI
TLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQDVGNLSGGNQQKVVIAKWLAT
QPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
IAAEVQGDDLTPETLVRHAAGIAPVTESIPA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcacaccctatctgcagatgtgcccgtggtatccatggatgccatcaccaag
acgtttccgggggtcaaagcgctggatcaggtcaggcttgatctttaccccgggcaggtc
acggcccttgtgggcgaaaacggggcggggaaatccacgaccgtcaaaatcctgaccgga
atttatcagccggacgggggcaccatccggatcgcgggcgcgccggttattctgaacact
ccgaatgacgcctccgccgcagggatcacggccatccatcaggaaacggtgttgtttgat
gagcttacggttgctgaaaacatcttcatcggtcacgcgccgcgcacaaaatggggtttg
atcgacaaggcagcgatgcaccgcaaggcgcgcggactgctggacgagatcggtgcgcct
ttcgacacgggtgcctatctgcgcgaactgggcattgcgaataaacatctggtggccatc
gcccgcgccttgtcggtggatgcccgcgttgtgatcatggacgagccgacggcagcgctg
tcccacaaggaaatcgaagagctctatgaactggtcgaaaccctgaaagcgcagggaaag
gcgatcctcttcatcagccataagttcgacgagattttccgcattgctgaccgctacacg
gtgtttcgcgacggggcctttgtcagcgatggcctgatcagtgacattgatcaggacgcg
ctggttaaaatgatggtggggcgggcggtcgatcacatctttcccgaacgtcaggcagcg
cttggcgaggaggtgctgcaggttacaggctatgcgcatcccacggaattcgccggtatc
gggttcacgctgaaacgcggtgaaatcctcgggttttacggacttgtcggggcagggcgc
tccgaattgatgcaagcgctctttggcatcacccggcccagcaaaggggtgacaaagatc
aatggggacattcgcgtgatccgctctcctgcggacgcagtgaacaacgggattgtctat
gtccccgaggatcgcggcaagcagggtgcggtgatcgggttgccgatttttcagaacatc
accttgccctcacttggccgcacgtcgcaatcgggctttttgcgcatggccgaagaattc
aaactggcgcgcgactatgccgagcggctggatctgcgcgccgccgcccttgatcaggat
gtgggcaacctgtcggggggcaaccagcagaaagtcgtcattgccaagtggctggccacg
caaccgcaggtcatcattctggatgaaccgaccaagggcatcgacatcggctccaaggcg
gcggtgcatgagttcatggccgagcttgcaggccaaggcctcgcggtcatcatggtcagt
tccgagatacccgaagtcatcggcatgtccgatcgtgtgatcgtgatgcgtgagggtcgc
atcgccgccgaagtgcagggcgatgatctgacgcccgaaacccttgttcgccacgccgcg
ggcattgcaccagtgacagaaagtatccccgcatga
DBGET
integrated database retrieval system
