Roseobacter litoralis: RLO149_c023330
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Entry
RLO149_c023330 CDS
T01572
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c023330
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RLO149_c023330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_24
TetR_C_13
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
AEI94303
UniProt:
F7ZBB7
LinkDB
All DBs
Position
2392291..2392899
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AA seq
202 aa
AA seq
DB search
MTKTETRIQKKNQAAIMTAGLKVFSQYGFRGSTLDQIAAEAGLSKPNILYYFASKDAIYR
ALLTRLLDEWLQPIYEIDASGDPVEELLSYARRKLEMSRDYPRESRLFANEVIQGAPRIG
DALSGELRRVVNKIAAIIDGWIREGRIQPVDPHHLIFSIWSMTQHYADFDVQVRAILPDQ
DPFPGAEQHLEDMLRRMLTPQT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagactgaaacgcgcatacagaaaaagaatcaagcagccatcatgacggctgga
ttgaaggtgttttcgcaatacggatttcgcggatccactctggatcagatcgccgctgaa
gcaggcctgtcaaagccgaacatactatattatttcgcctcaaaggacgcgatttatcgc
gcgcttttaacgcgtttgctggacgaatggctgcagcccatttacgagatagatgccagc
ggggacccggtcgaagagctactgtcctatgcccgccgcaagcttgagatgagccgggat
tacccgcgtgaaagccgcttgtttgccaatgaggtgatacagggcgcgccgcgcatcggc
gacgccctcagcggtgagttgcgtcgcgttgtcaacaagatcgctgcgatcatcgatggc
tggatccgcgagggtcgcatccagcccgtagatccgcatcacctgattttctcaatctgg
tccatgacgcaacactatgcggattttgacgttcaagtgcgcgccatcctgccggatcaa
gacccgtttccgggggccgagcagcacctcgaagacatgctccggcggatgctgacccct
caaacctaa
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