Roseobacter litoralis: RLO149_c024030
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Entry
RLO149_c024030 CDS
T01572
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rli
Roseobacter litoralis
Pathway
rli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RLO149_c024030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c024030
Enzymes [BR:
rli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RLO149_c024030
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RLO149_c024030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEI94372
UniProt:
F7ZBY6
LinkDB
All DBs
Position
complement(2459069..2459686)
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AA seq
205 aa
AA seq
DB search
MIETDRDVAEGALWLSKACPRLAYALAQTGPLPLRRRPDGFAQLLSAIVSQQVSVASARA
IWSKLEAAGMVDPATVQAAREDDLRALGLSRQKIRYAHALAGADINYDALRSLPDSDVIK
TLVAVPGIGNWTAEIYAMFSLGRADVFAPGDLALQEAARSLYALEARPKERALREMADAW
SPWRSVAARLLFAYYRVVKQREGIT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaaacagacagggatgtggccgagggcgccctttggctgtcaaaagcttgcccg
cgtctggcctatgcgttggcgcagaccggccccttgccgctgcgacgccgccccgatggg
ttcgcgcaactgctgagtgcgattgtcagccagcaggtcagcgtcgcctcagcacgggcg
atctggtccaaactggaagcggcggggatggttgatccggccactgtgcaggccgctcgc
gaagatgatctgcgcgcgcttggtctcagccgacaaaagatccgctatgcccatgcgctg
gccggtgccgatatcaactacgatgctttgcgcagcttgcccgacagtgacgtgatcaag
acgcttgtggcggtgcccggcatcggaaactggacggcggaaatctatgcgatgttcagc
cttgggcgcgcggatgttttcgcgccgggcgatctggccctgcaggaagcggcgcgcagc
ctttatgctcttgaggcgcgccccaaggaacgcgcgctgcgcgagatggctgatgcatgg
tcgccatggcggtcggttgcagcgcggctcttgtttgcgtactaccgcgtggtcaagcaa
cgtgaagggatcacatga
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