Roseobacter litoralis: RLO149_c024320
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Entry
RLO149_c024320 CDS
T01572
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rli
Roseobacter litoralis
Pathway
rli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RLO149_c024320 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c024320 (ung)
Enzymes [BR:
rli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RLO149_c024320 (ung)
DNA repair and recombination proteins [BR:
rli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RLO149_c024320 (ung)
Prokaryotic type
RLO149_c024320 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEI94400
UniProt:
F7ZC14
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All DBs
Position
2491847..2492503
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AA seq
218 aa
AA seq
DB search
MKRLGAWRALPFFADTWPDICDVLKNETAPVLPPADDIFAAFARTQPQQTRVVILGQDPY
PTPGHAHGFAFSASAQTRPLPRSLSNIFKEMEADLGAAPPHADLRFWADQGVLLLNTALS
VRAHDAGSHAKIGWHVLTQQVLAHLDDQPRAFLLWGAHAQKAARDVDPIRHLKLETAHPS
PLSARRGFFGSRPFSRVNDWLQAQGHQAINWSNPPEAP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagactgggggcatggcgcgcgctgcccttttttgcagatacatggccggacata
tgcgacgttctcaagaatgagaccgcgccggtattaccgcctgcagatgacatctttgcc
gcttttgcgcgcacccagccgcagcaaacgcgcgtcgtgatccttggtcaggacccctat
ccgacacccggtcacgcccatgggtttgccttttccgccagcgcccaaacacgccccttg
cccagatcgctgtccaacatcttcaaagagatggaagcggacctcggtgccgcgcccccg
catgccgatctgaggttttgggccgatcagggcgttttgcttttgaacacggcgctgagc
gtccgcgcccatgatgccgggtcacatgcaaagatcggatggcatgtcctgacgcaacag
gtgctcgcacatcttgatgatcagccgcgcgcttttctgctgtggggagcgcatgcgcaa
aaagcggcgcgcgatgttgatccgatccgtcatctgaagctagagaccgcgcatccttcg
cccctgtctgcgcggcgtggctttttcggctcacgccccttcagtcgcgtgaatgactgg
ttgcaggcgcagggccatcaggccataaactggagcaatccgccggaggcaccatga
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