Roseobacter litoralis: RLO149_c025310
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Entry
RLO149_c025310 CDS
T01572
Symbol
appF
Name
(GenBank) oligopeptide transport ATP-binding protein AppF
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rli
Roseobacter litoralis
Pathway
rli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLO149_c025310 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rli02000
]
RLO149_c025310 (appF)
Transporters [BR:
rli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RLO149_c025310 (appF)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
AAA_25
RsgA_GTPase
AAA_5
AICE_RepA
ATP-synt_ab
AIG1
Motif
Other DBs
NCBI-ProteinID:
AEI94499
UniProt:
F7ZCS5
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All DBs
Position
complement(2590850..2592694)
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AA seq
614 aa
AA seq
DB search
MLDHEPQGQDIHPIAQIKSLRVEFQTKDGPVLGVEDVSFDINPGETVCVVGESGSGKSVS
SLSLMRLVEFGGGKITGGQLLFDRAEAADVDLADTEAELMRSIRGNEIGMIFQEPMTALN
PVFTIGRQLTEGLRLHKKLSKSEAEARALELLREVRIPEPERRLTQYPHELSGGMRQRVV
IAMALACKPRLLIADEPTTALDVTIQAEILALIDRLKRETGTAVMFITHDMAVVAQMADR
VVVMFRGNKVEEGPVETIFENPQHPYTKALLAAVPKLGEMTGKEFPEPMKLLGREGAQIA
PIPGTNEVLLSVKNLTTRFPVKGGFFRRTVANVHAVEDLSFSINKGQTLSLVGESGCGKS
TAGRSILRLVDPMAGEIMLGDKDIMALDPKGLREARLDMQMIFQDPFASLNPQMQLADQV
AEPIHNYATLKGQAVADRVAMLFDRVELPRSFMRRFPHELSGGQRQRVAIARALALNPKL
IIADEAVSALDVSVQAQVLNLMMELQSEMGISFLFISHDMAVVERVSHHVGVMYLGRIVE
LGPRASVFENPQHAYTQALMKAVPIADPRQRKDEKDLNFKPIPSPIHPVSYEAQPSVYRE
VAPGHMILETDSGY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctagatcacgaaccgcaaggccaggacattcatccgatcgcgcagatcaaaagtctc
agggtcgaatttcagaccaaagacggcccggtcctcggggtcgaagatgtgtcatttgac
atcaatccgggtgagaccgtctgcgtggtgggggaaagcgggtcgggcaaatccgtgtcc
tcgctgtcgctgatgcgactggtagaattcggtggcggtaaaatcaccgggggtcagctt
ctttttgaccgggcggaagcggcggatgtggatcttgcagacacagaagcggagttaatg
cgcagcattcgcggcaacgaaatcgggatgatttttcaggagccgatgacggcacttaat
ccggtctttactatcgggcggcaattgaccgaaggactgcggctgcacaaaaagctcagc
aagtctgaggcggaggcccgcgcgctggaattgctgcgcgaagttcggatacccgaaccc
gagcggcgcctgacacaatatccgcacgagttgtcggggggcatgcggcagcgggtggtg
atcgccatggcgctggcctgcaagccccggcttttgatcgcggatgaaccgacaacagcg
ctggacgtcaccattcaggcggaaattctggcgctcatcgatcggctcaagcgtgaaaca
ggcacggcggtgatgttcatcacccatgatatggcggtggtggcgcagatggcggaccgc
gtggttgtgatgtttcgcggcaacaaggtcgaggaaggcccggtcgaaaccatcttcgaa
aacccgcaacacccctacaccaaggctttgctggcggccgtgcccaaattgggtgaaatg
acgggtaaggaattccccgaaccgatgaagcttctgggccgcgagggcgcgcagatcgcg
ccgatccccggcaccaatgaggtcttgctgagcgtcaaaaacctgacgacgcgctttccg
gtcaagggcgggtttttccgccgcacggtggcaaatgtccatgcggttgaagacttatcg
ttcagcataaacaagggtcagacgctgagccttgtgggcgaatccggctgtggcaaatca
accgcagggcggtcgatcctgcggcttgtcgatccgatggcgggtgaaatcatgctgggt
gacaaggacatcatggcattggacccaaaaggtctgcgcgaggcgcgtcttgacatgcag
atgatctttcaggacccgtttgcctcgctcaacccgcagatgcagcttgccgatcaggtg
gctgagccgatccataactacgccacgctcaaagggcaggccgtcgcggaccgggtcgcg
atgctgtttgaccgggtggaattgccacgcagtttcatgcgccgctttccacatgagctg
tcaggcgggcaacggcaacgggtggcgattgcgcgcgcgctggccctgaaccccaagctg
atcatcgcggacgaagcggtttccgcgctggatgtgtcggtgcaggcgcaggtgctgaac
ctgatgatggaactgcaatccgagatggggatttcgttcctgttcatcagtcacgacatg
gccgtggttgagcgtgtcagccatcatgtcggtgtcatgtatctgggccgcattgtggaa
cttgggccgcgtgccagtgtctttgaaaacccgcaacatgcctatacgcaggcgctgatg
aaagcggtcccgattgcggatccacgtcagcgaaaagacgagaaagatttgaatttcaaa
ccgataccgtcgccgatccatcctgtcagttatgaggcgcagccctcggtttaccgcgag
gtggcaccgggtcacatgatcctcgaaaccgatagcggctattag
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