Roseobacter litoralis: RLO149_c025320
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Entry
RLO149_c025320 CDS
T01572
Symbol
appA
Name
(GenBank) oligopeptide-binding protein AppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rli
Roseobacter litoralis
Pathway
rli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLO149_c025320 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rli02000
]
RLO149_c025320 (appA)
Transporters [BR:
rli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RLO149_c025320 (appA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EAD9
Motif
Other DBs
NCBI-ProteinID:
AEI94500
UniProt:
F7ZCS6
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All DBs
Position
2592962..2594692
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AA seq
576 aa
AA seq
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MKLRTLLMGAIATASFAPAVLAVGHEGERGRDGQLNIIYWQAPSTLNPFLSGGTKENEAA
SLVLESLARFNEAGEMVPWLAEEIPTVENGGVAADQTSITWTLREGLVWSDGTAVTADDI
LFTHEYCTHPESGCASLSYFDGISSVEAVGERGVKISFDSPKPFPYTAFVGAEAPILQKA
QFQDCLGARAPECTEANFGPIGTGPFVVEEFRPNDVIIYVANENYRDANKPAFARVTLKG
GGDAAAAARSVLETGEFDYAWNLQLAPDVLSRMEEAGKGTVITAYGTSVERLMINQTNAD
PSLGPDKRSVFLNGENPHPFLTDPAVGQALSMAIDRDLIDEIGYGAGGQPTCNVLPAPEL
YASTANDACLVQDIDGANAILDAAGWVDTNGNGARDKDGVELSILFQTSTNAVRQDTQAL
IKDWWRQIGVETELRNIDGSVFFGGDPGSPDTFQKFYADVEMYTNNFAGVDPEAYMGNWV
CADIPRPQTQWQGNNMQRFCDPEYDALVQQMSTTTDLAERGELAKKMNDMLVQSWSIIPL
IHRGSPSAHANTLGGVKMSDWDSELWNIADWYRNDG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagaacattactgatgggcgcaatagcgaccgccagctttgctcctgccgtc
cttgcggttggacatgagggcgagcggggacgcgatggccaactgaacattatttattgg
caggccccctcaacgctcaaccctttcctgtccggtggtacaaaggaaaacgaagcggca
agccttgttctggaatccctggcgcggttcaacgaagcgggcgagatggtcccctggctt
gccgaagaaatcccgacggttgaaaatggtggcgtggcggctgatcagacctcaataact
tggacgctgcgcgagggtcttgtttggtctgatggcaccgcagttacggccgatgacatt
ctgttcacacatgagtactgcacccatcctgaaagtggctgcgcatcgctgagctatttc
gacggcatcagttcagtggaagccgtgggcgagcgcggcgtgaaaatcagcttcgacagc
cccaaaccttttccatacacagcctttgtcggtgctgaggccccaatcctgcaaaaagcg
cagtttcaggactgtcttggcgcgcgtgcaccggagtgtaccgaagccaatttcggcccg
atcggcacaggccccttcgtggtggaggaattccgcccgaacgacgtaatcatctatgtt
gcgaatgaaaactatcgcgacgcgaacaaacccgcttttgcgcgggtcacattgaagggt
ggcggcgatgccgcagccgccgcgcgctcggttctggaaacaggcgaatttgactatgcc
tggaacctgcagcttgcacccgatgtcttgtcacgcatggaagaggctggcaaaggcaca
gtgatcacagcctatggcacgtcagtcgagcggttgatgatcaaccaaacgaatgccgac
ccatcgcttggcccggacaaacgttcggtctttttgaacggcgaaaacccgcaccccttc
ctgactgaccctgccgtgggacaagcgctttcgatggcgatcgaccgcgatctgatcgat
gagatcggctatggtgcgggcggccagccgacctgcaacgttctgcccgcccccgaactt
tatgcgtcaaccgcgaatgatgcctgcctcgtacaggacattgacggcgcgaacgcaatt
ctggatgcggccggctgggttgatacaaacggcaacggtgcgcgcgacaaggatggggtc
gaactgtccattctattccagacatcgaccaatgccgtgcgccaggacacgcaggccctg
atcaaggattggtggcgccagatcggtgttgaaaccgagttgcgcaatatcgacgggtca
gtcttctttggcggcgatccgggctcaccggatacgttccagaagttctatgcagatgta
gagatgtacaccaataacttcgccggggtcgatcccgaagcctatatgggcaattgggtc
tgcgccgacatcccgcgcccgcagacacagtggcagggcaacaacatgcaacgcttctgc
gatccggaatacgacgcattggtgcaacagatgtccacaaccaccgatctcgccgaacgc
ggtgaactggccaagaaaatgaacgacatgcttgtccaaagctggtcgatcatcccgctc
atccaccgcggcagcccatcagcgcatgccaatacactcggcggggtcaagatgtcggat
tgggacagcgagctatggaatatcgccgactggtaccgcaacgacgggtga
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