Roseobacter litoralis: RLO149_c026400
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Entry
RLO149_c026400 CDS
T01572
Name
(GenBank) HTH-type transcriptional regulator, DeoR family
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c026400
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
RLO149_c026400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_IclR
HTH_PafC
CggR_N
HTH_5
DUF1670
DUF977
HTH_38
HTH_28
RepL
HTH_Crp_2
MarR
Polysacc_deac_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEI94603
UniProt:
F7ZDK1
LinkDB
All DBs
Position
complement(2705692..2706471)
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AA seq
259 aa
AA seq
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MSENFDLAAVRRRKIAELVRARGAMGIRDLGLQFGVSEATIRRDLKTLDDEGIVVRTHGG
VLMNANVRVDLPNEERKAVGAAEKRRIGEAAIEMLSDDEVVFLDAGTTAHAVAAHAHKKS
RCTYVTTSLGVANQLQAQGIVNFYMIGGSYEPVNDSFAGTLAISALRSLSFDIAFLCCSA
VDVPKRSISVASEVYAQVQKEVILNTRRCFVIADASKFKPNAFMRTSCFDQITGIITNRE
LDSGTIADVKDADLELVLV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattttgatctcgcagccgtgcgacggcgcaaaattgcggagttggtcaga
gcgcgtggcgccatgggcattcgtgatcttggtctgcaattcggtgtatcagaggcaaca
attcgacgggatctcaagacgctggacgatgaaggcattgttgtgcggacacatggcggc
gttttgatgaacgccaacgtccgggtcgatctgccgaatgaagagcgcaaagctgtcggc
gcggcagaaaagcgacggatcggcgaggctgcaatcgaaatgctctctgacgatgaggtg
gtgtttctggatgcaggcacaactgcgcatgccgtggcggcccatgcccataaaaaatca
cgctgtacctatgtcacgacttcgctgggcgtggccaatcagttgcaagcgcaggggatc
gtgaatttctacatgatcggaggctcctacgagccggtgaacgattcattcgcgggaacc
ttggcgatatcggccttgcggtccttgtcgtttgatatcgcctttttgtgctgctcggcg
gtggatgttcccaaacggtccatcagcgtcgccagcgaagtttacgcgcaggttcaaaaa
gaggtcatcctcaatactcgccgctgctttgtgatcgcggatgccagcaagttcaaaccc
aatgccttcatgcgcacgtcatgtttcgatcagataacgggcatcattaccaaccgcgaa
cttgattcaggcacgatcgccgatgtcaaagacgccgatctggagcttgtcttggtatga
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