Roseobacter litoralis: RLO149_c027410
Help
Entry
RLO149_c027410 CDS
T01572
Name
(GenBank) OmpA-like protein
Organism
rli
Roseobacter litoralis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF2304
Motif
Other DBs
NCBI-ProteinID:
AEI94703
UniProt:
F7ZF80
LinkDB
All DBs
Position
complement(2798734..2800713)
Genome browser
AA seq
659 aa
AA seq
DB search
MALSRRTGARFQASIWPGFVDAMTGLLLVLMFVLTIFMVVQFVLTERITGQETELDQLAG
EVAALAQALGLEEQTSAQLRGRVGELDATLSDAQARIAALTTTRDAQAQALSQAQTRITD
FEAQVAALITQRDAALGTVSSLEDARAALEAAQAELTSERDALNSALAASRSEVDLQAEE
ARLAAARREALEALVADLEGQNTQAQGQILELTAQVDDAAQALSQEEAGRLAEAAAAELL
RARLQDADAELTAMTLALERQRQEAEETLTLLAAARAAEADLDEELAAALLAIDGFEAQE
AEAQTVQEALRASQTEQDLIAARLAQVLADLDAAQRTAALEAAARAAAEALALETQQDAE
SGAAALRAQLAAALAAKQAAEILAADTTSEVERRASLLAQARNELAQQEQISERAQRQTE
LLNQQVAALRTQLGDLQAVLDDAKERDTAQQVQLQSLGSELNTALARVAAEERRRAELEE
AERLRLQEEKARLEAEAARLTAETKNLEQYRSEFFGRLRDVLGRQEGVRIEGDRFVFSSE
VLFEPARADLSAEGQQEIAKVARILSSIADEIPPEIDWIIRVDGHTDNLPLSGVGQFADN
WELSQGRALSVVKYMVESLGIPPNRLAANGFGEFQPVAVENTPQARAQNRRIELKFTER
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgcggcgaacaggtgctcggtttcaggcgtcgatctggcccggatttgtc
gacgccatgacgggtcttttgctggtgctgatgttcgttctgaccattttcatggtagtg
caattcgtcctgaccgagcgcattaccggtcaggaaaccgaattggaccaactggccggt
gaagttgcagcactcgcgcaggccctcggtttggaagagcagacgagtgcacaactaagg
ggtcgtgtcggtgagttggatgcgacattaagtgatgcacaagcgcgcatcgcggcctta
accacgacgcgcgacgcgcaggcccaagccctgtcgcaagcacagacacggatcacggat
tttgaggcgcaggtcgcggcattgataacgcagcgggacgcagccttgggaaccgtttcc
tcattggaggacgcccgtgcggcactggaggcggcgcaagccgagctgaccagtgaacgg
gacgctttgaattcggcattggcggcttcgcgttcagaggttgacttgcaagcagaagag
gcccggttggccgcagcccgtcgtgaagcgcttgaagcgctcgtggcggacctcgaaggg
cagaatacacaagcacagggtcagattctggaattgaccgctcaggtggacgacgcggct
caggcgttgtcacaagaggaagcagggcggctggccgaggctgctgccgcagaactgctg
cgcgcgcgccttcaggatgcggacgctgaactcaccgcaatgaccttggcgttagaacgc
cagcgacaagaggcagaagagacgttgaccctattggccgcggcacgggcggcagaagcg
gatttggatgaggaacttgccgcagcgttgctcgcgatcgacgggtttgaggcgcaagag
gctgaggctcaaacggtgcaagaggccttgagggcgtcgcaaacagagcaagacctgatc
gcggcgcggctcgcgcaggttttggccgacttggatgccgcgcagaggacggctgcgttg
gaagcagctgcgcgggcggcagcagaggcgttggccttagagacgcaacaggacgccgaa
tctggtgccgctgcactgcgcgctcaacttgcggcggcgctggcggcaaagcaggctgcg
gaaatactggctgctgacaccacatctgaagtggagcgtcgcgcatctcttttggcgcag
gcgcgtaacgaattggcgcaacaggaacaaatcagcgagcgggcgcagcggcagacagag
ctgctaaaccaacaggttgccgcattgcggactcagttgggtgatttgcaggcggtgctg
gacgatgcaaaagaacgtgatactgcgcaacaggtgcaactgcagtcgctcggttcggaa
ttgaacacggccttggcacgtgtggccgccgaagaacgccgcagggcggagttggaagag
gccgaacgcttaagattgcaggaagaaaaggcgcgccttgaggctgaggccgcgcgtctg
accgccgagacaaagaacctggagcaataccgctcagagttttttggacggttgagggat
gtgctggggcggcaagaaggcgttcgaattgaaggcgaccgtttcgttttctcttctgag
gtgctgttcgagcccgcgcgcgcggatttgtctgccgaaggtcagcaggaaatcgcgaag
gttgcacggattctttcaagcatcgcagatgaaattccaccggaaattgactggatcatt
cgcgtggacggtcatactgataacttgcccctttccggtgtcggacagtttgccgacaat
tgggagttaagtcaggggcgcgcattgtccgttgtgaaatacatggtggaaagccttggt
attccgccgaaccgtcttgcggcgaacgggtttggtgagtttcagcctgtggcagtggaa
aacaccccgcaagcacgggcgcaaaaccgtcggatcgagttgaagtttacagagcgctag
DBGET
integrated database retrieval system
