Roseobacter litoralis: RLO149_c027540
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Entry
RLO149_c027540 CDS
T01572
Name
(GenBank) HTH-type transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rli03000
]
RLO149_c027540
Transcription factors [BR:
rli03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RLO149_c027540
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AEI94716
UniProt:
F7ZF93
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Position
2813466..2814398
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AA seq
310 aa
AA seq
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MSDRLPPLTALRAFDAAARHMSFAKAADELSVTPAALSFQIKSLEAHLGAPLFRRLNRAV
ELTEAGQVLAPGAADGFATLTVAWRAAQRLQDEQTLTVTAGPAFTAKWLAPRLYEFAHTH
PEVELRFSASLKIVDFARDAVDVAVRFGRRVDPELWALPLAEEWVAPVMTPALAQKYPTP
ESLTKAPLIFDDSINFLQPAPDWAAWFRTMGIDYKPDHGPRFSQADHAIDAALAGVGVVL
GRRALVVKDIDEGRLVLPFPRAVSTGARFHFLCTRGSEDRPQVRAFREWIVAEIAKTAYI
TQGLEIVPIS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgcctacctcccctcacggcacttcgggcctttgatgcagcggcaagacat
atgtcttttgccaaggccgccgatgagctatcggtgacgcccgccgccctgagttttcag
atcaagtcacttgaggcacatctgggcgcgccattgtttcgacgcctcaaccgggctgtt
gagttaaccgaggccgggcaggtgcttgcgcctggtgcggctgatgggtttgccacgctg
actgtggcgtggcgtgcggcgcaacgcctgcaggacgaacaaaccctgacggtcactgca
ggccccgccttcaccgccaaatggcttgcgccgcgcctgtatgaatttgcgcacacgcat
cccgaggtcgaactgcgcttctctgcctccctcaaaatcgtggactttgctcgggacgct
gtagatgttgctgtgcgttttggtcggcgggttgatcccgagctttgggcccttccactt
gccgaagaatgggttgcacccgtcatgacaccggctttggcgcagaaatacccaaccccc
gaaagcctgacaaaggcacctctgattttcgacgactcgatcaatttcttgcagcccgct
ccggattgggcggcatggttccgcacaatgggcatcgattacaagccagatcacggtcca
cgcttcagtcaggcggatcacgcaattgatgccgctctggcgggtgttggtgtggtcctg
gggcgtcgcgcgttggtggtaaaggatattgacgaaggtcggctggtgttgccctttccg
cgcgccgtcagcacgggtgcacggtttcatttcctgtgtacgcgcggttccgaagacagg
ccgcaagtgcgtgcatttcgcgaatggattgtcgcggagatcgcaaaaaccgcatatata
actcaagggttggagattgtacccatctcctga
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