Roseobacter litoralis: RLO149_c031340
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Entry
RLO149_c031340 CDS
T01572
Symbol
nirD
Name
(GenBank) protein NirD
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
rli
Roseobacter litoralis
Pathway
rli00860
Porphyrin metabolism
rli01100
Metabolic pathways
rli01110
Biosynthesis of secondary metabolites
rli01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RLO149_c031340 (nirD)
Enzymes [BR:
rli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
RLO149_c031340 (nirD)
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Paralog
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GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
HTH_24
HTH_20
HTH_IclR
HTH_5
DUF1499
Motif
Other DBs
NCBI-ProteinID:
AEI95090
UniProt:
F7ZJR5
LinkDB
All DBs
Position
complement(3215531..3216535)
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AA seq
334 aa
AA seq
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MTLDALDWRLMNDWQRALPLVSRPFQEIARHLDTTEARIIERLKKLLETGAISRIGATCR
PNTLAASTLAAVAAPDDQIEEIAAVINAQEGVNHSYERENKWNIWFVATGPTRAFVDDIL
RRITEQTGLRVLDLRLERPFNVDLGFALDGSNALPQPRAVDTDIKIEASDRAIMQALSEG
MMPTACPFADLAARLGQTEAEVLERVRVLAQSGILSRIGLIVRHRALGWRANAMCVFKVP
PDEIEACGRALTAVQGVTLCYERRAVPGVWPYTLYCMIHGRSRSETLDVLSQARVAARLV
PYEYRILFSTRCFRQQGALIVAPSDKTTGETDAD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggatgcgctcgactggaggctgatgaacgactggcaacgtgccttgccactt
gtgtcgcgcccctttcaggagatcgcgcgccaccttgataccactgaggcacgcatcatc
gaacgcttgaaaaagctgctggaaaccggcgcgatcagccgtatcggcgccacctgccga
cctaataccttggcggcgagcacgcttgccgcagttgcagcccccgacgatcagatcgaa
gaaatcgccgccgtgatcaatgcgcaggaaggggtcaaccattcctatgagcgtgaaaac
aaatggaacatctggtttgtcgcgaccgggcccacgcgcgcttttgtcgatgatatcctg
cggcgcatcaccgaacagacgggcctgcgggtgctcgatctgcggcttgagcggcctttc
aacgtggatctcggatttgcgctggatggctcgaacgcgctgccgcaaccgcgcgcggtc
gacacggacatcaagatcgaagcaagcgaccgcgcgatcatgcaggccctgtccgaaggg
atgatgcccaccgcctgcccgtttgccgacctcgccgcgcggctgggtcagaccgaggct
gaggtgctggagcgggtccgcgtgctggcgcaatcggggatcttgtcgcgtattggtctg
atcgtgcgccaccgggcccttggatggcgggccaatgcgatgtgcgtcttcaaggtgccg
ccggacgagatagaggcctgcgggcgtgcgctgaccgccgtgcagggggtgacgctgtgt
tacgagcggcgcgccgtgccgggggtctggccctatacgctttactgcatgatccatggg
cgcagccggtccgaaacgctggatgttctgagccaggcccgggtggccgcgcgtctggtg
ccctatgaataccgcattctgttcagcacccgctgttttcgccagcagggcgcgctgatc
gttgcgccatccgacaagaccacaggagaaacagatgcagattga
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