Roseobacter litoralis: RLO149_c034050
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Entry
RLO149_c034050 CDS
T01572
Name
(GenBank) putative P-loop containing ATPase
KO
K06958
RNase adapter protein RapZ
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rli03019
]
RLO149_c034050
Messenger RNA biogenesis [BR:
rli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RLO149_c034050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
DUF3189
SKI
Rad17
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AEI95346
UniProt:
F7ZLV2
LinkDB
All DBs
Position
complement(3469145..3470032)
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AA seq
295 aa
AA seq
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MTDTSTTARRIVFVTGPSGAGRSSALNVLEDAGFEVVDNLPLRLLDAFLDVPASAKPLAL
GIDPRNRDFSTTVVVDALGKLTGIAGLAPELLYLDCSTEVLLRRFSETRRRHPLAPDDRP
SEGIVRELEMLGPLKARADVLIDTTDLNVHQLRAEVEHWFAPGGKRRLTVSVQSFSYKRG
LPRSVDMVLDCRFLTNPYWVPELRSLNGTHALVEKHVMADPRFEQFAQKVEELSLLLLPA
YREEGKSYLSIAFGCTGGQHRSVVMAQFHALRLAEEGWQVSIRHRELDLRKNEET
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacatcaaccaccgcacggcgcatcgttttcgtcaccggtccctcgggggca
ggtcgatcaagcgcgttgaatgtgcttgaggatgcgggttttgaagtggtagataatctt
cccttgcgcctgcttgatgcgtttttggatgtccccgccagcgcaaaaccgctggcattg
ggaattgacccgcgcaacagggatttttccacgaccgttgttgttgatgcgcttggtaag
ctgacgggtattgcgggtctggcgccggagcttttgtatctagattgttcgaccgaggtg
cttttgcgcaggttctcagaaacaaggcgcaggcaccctcttgcgcctgatgatcgtcca
tcagaaggaattgtgcgcgaacttgagatgctcggccctctgaaggcgcgggccgacgtg
ttgatcgacacgacggatctgaatgtgcaccagttgcgcgcagaagtggaacactggttt
gcgccgggcggaaagcgccgccttactgtgtctgtgcagtccttctcctacaaacgcggg
ttgccgcgcagcgttgatatggtgctcgactgtcgctttctgaccaatccgtactgggtg
ccggaattacgcagtttgaatggcacgcatgctttggtcgaaaaacatgtgatggctgac
ccccgttttgaacaatttgcgcagaaagtggaggagctgagcctcttgctgctgcccgct
tatcgcgaggagggaaagtcatacctgtcaatcgcctttgggtgtaccggcggtcaacat
cgctctgttgtgatggctcaattccatgctttgcgccttgcagaagaaggctggcaggtg
tcaattagacatcgtgaattggacctgcggaaaaatgaagagacctga
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