Roseobacter litoralis: RLO149_c034680
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Entry
RLO149_c034680 CDS
T01572
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rli
Roseobacter litoralis
Pathway
rli02024
Quorum sensing
rli03060
Protein export
rli03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RLO149_c034680 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RLO149_c034680 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLO149_c034680 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rli02044
]
RLO149_c034680 (ffh)
Enzymes [BR:
rli01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RLO149_c034680 (ffh)
Secretion system [BR:
rli02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RLO149_c034680 (ffh)
Eukaryotic Sec-SRP protein
RLO149_c034680 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_16
AAA_33
AAA_31
Zeta_toxin
AAA_22
ResIII
AAA_30
Thymidylate_kin
VirC1
NACHT
AAA_5
AAA_7
AAA_14
AAA_18
APS_kinase
YqeC
nSTAND3
KTI12
DUF87
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AEI95409
UniProt:
F7ZA62
LinkDB
All DBs
Position
3526538..3528049
Genome browser
AA seq
503 aa
AA seq
DB search
MFENLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQEKAT
GQAVTKSITPGQQVVKIVHDALIDVLKGEGEPGTLKVDNPPAPVLMVGLQGSGKTTTTAK
LAKRLKEKDGKRVLMASLDVNRPAAMEQLAILGAQIGVDTLPIIAGQDPVAIAKRAKTQA
GLGGYDVYMLDTAGRLSIDEELMQQVEAVRDVANPRETLLVVDGLTGQDAVHTAQNFDER
IGISGVVLTRMDGDGRGGAALSMRAVTGKPIKFVGLGEKMDALETFEPDRVAGRILGMGD
IVALVEKAQETLELEQSEKMVKRMMKGHFTMNDLRMQLEQMQKMGGMQGMMGMMPGMGKM
AKQVEDAGFDDNILKRQIALIQSMTKKERANPQILQASRKKRIAKGAGLEVSELNKLLKM
HRQMGDMMKKMGKMGKGGMMKQAMKGMFGKGGASPQDMAAGMDPKALEAAAKQMGGRLPG
GLGGMGGGGAALPPGLSGFGKKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgtccgaacgcctctccggcgtctttgaccgtctgacaaagcaaggt
gcgctctccgaggaggacgtgaaaaccgccctccgtgaggtccgcgtcgccctgctggag
gcggatgtctccctgcccgtcgcgcgcgatttcgtcaaagcggtacaggaaaaagccacc
ggacaggccgtcacaaaatccatcacgcccggccagcaggtcgtcaagatcgtacatgac
gcgctgatcgacgtgctcaagggcgagggcgaacccggcacgctcaaggtcgacaaccca
cccgccccggtcctgatggtcggcctgcaaggctccggtaaaaccacgaccaccgccaaa
ctggcaaaacgcctcaaggaaaaagacggcaaacgcgtgctgatggcctcgctcgacgtc
aaccgccccgccgcgatggaacaactcgccatcctcggtgctcagatcggtgtcgacacc
ctgccaatcatcgccggacaggaccccgtcgccatcgccaaacgcgccaagacgcaagcc
gggcttggtggctatgacgtctatatgctggacaccgccgggcgtctgtccatcgacgaa
gagttgatgcaacaggtcgaagccgtccgcgacgtcgcaaacccgcgcgaaacgctgctg
gtggtcgacgggctgaccggtcaggacgccgtgcacaccgcccagaactttgacgaacgc
atcggcatctccggcgtggtgctgacccggatggacggtgacgggcgcggtggtgccgca
ctttccatgcgcgcggtcaccggcaaaccgatcaaattcgtcggcctcggcgaaaagatg
gacgcgctcgaaaccttcgagccggaccgcgtggcaggccgcatcctcggcatgggcgac
atcgtggccctcgtcgaaaaagcgcaggaaacgctcgaacttgagcaatccgagaaaatg
gtcaaacgcatgatgaagggtcacttcaccatgaacgacctgcgcatgcagcttgaacag
atgcagaaaatgggcggcatgcagggcatgatgggcatgatgcccggcatgggtaaaatg
gccaaacaggtcgaggatgcaggctttgacgacaatatcctcaagcgccagatcgcgctg
atccagtcgatgaccaagaaagaacgcgccaacccgcaaatcctgcaggccagccgcaaa
aagcggatcgccaagggcgcggggctggaagtctccgaattgaacaaactgctcaagatg
caccgacagatgggcgacatgatgaaaaagatgggcaaaatgggcaagggcggcatgatg
aaacaggccatgaaaggcatgttcggcaagggcggtgcgtcgcctcaggacatggccgca
ggcatggaccccaaagcgctcgaagccgctgccaaacaaatgggcggcaggctgcccgga
ggtctcggcggcatgggcggtggcggtgccgcgctgccaccgggtctcagcgggttcggt
aagaagaaatga
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