Roseobacter litoralis: RLO149_c035670
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Entry
RLO149_c035670 CDS
T01572
Name
(GenBank) photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rli03400
]
RLO149_c035670
Enzymes [BR:
rli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RLO149_c035670
DNA repair and recombination proteins [BR:
rli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RLO149_c035670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AEI95506
UniProt:
F7ZAW4
LinkDB
All DBs
Position
complement(3620373..3621899)
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AA seq
508 aa
AA seq
DB search
MSHLVLVLGDQLSESLSALQAADKSTDMVVMSEVADETSYVQHHPKKIALIFAAMRKFAQ
HLRDEGWNVAYAQLDDSENAGSIVGELLRRAEQTGAQTVLATEPGEWRLIGHLKEAPLRV
EMLPDGRFLASHQEFEDWADGRKQLRMEYFYREMRRKTGLLMEGAQPSGGKWNFDHDNRK
PAPDEITFEGPLRFEPDETVQEVLDLVEVRFSNHFGALRPFWFATSRAEALQQLDHFISK
GLPKFGDFQDAMLNDNRFLYHGLISTSLNIGLLTPLEVCTAAARAFEQGDAPINAVEGFI
RQIIGWREYVRGIYFLEGPDYTSRNVLGQTRDLPDVYWGGKTGMNCMAKAVGQTREEAYA
HHIQRLMITGNFGLLAGIDPQQMHEWYLAVYADAFEWVEAPNTVGMSQFADGGIIASKPY
VSSGAYINRMSDYCKSCSYKVAQKTGDTACPFNLLYWHFLDRHRPRFSGNARMGNMYRTW
DRMDAEKRETVIAEANALLDRLDAGEAI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgagccatctcgttctggtgctgggggaccagctgtctgaaagcctcagcgcgttgcag
gcggccgataaatcgaccgatatggtcgtgatgtccgaggttgcagatgaaacctcctat
gtgcagcaccatccgaaaaagatcgcgctgatctttgcggccatgcggaaattcgcgcaa
cacttgcgtgatgaaggttggaacgttgcctatgcgcagctggatgacagcgaaaacgcg
gggtccatcgttggtgagctgttgcgccgggcagagcaaaccggggcgcaaaccgtactg
gcaacagagccgggagagtggcgccttatcgggcacctcaaagaggcacctttgcgggtt
gagatgctgccagatggccgatttcttgcgtcccatcaggagtttgaggattgggccgac
gggcgcaagcagttgcggatggagtatttctatcgcgagatgcggcgcaagacgggcctg
ctgatggagggggctcaacccagcggcggcaagtggaatttcgatcatgacaaccgcaaa
ccggcacccgatgagatcacctttgaagggcctttgcggtttgagccggatgaaaccgtg
caagaggttctggatctggtggaggtgcggttttcaaaccattttggcgcgctgcgcccg
ttctggtttgcaacatcccgcgccgaagcgctgcaacagctggatcatttcatatcgaaa
ggcttgccaaaattcggagattttcaggatgcgatgctgaatgacaatcggttcttgtat
cacggtctgatctcaacctcgctgaacatcgggttgttgacaccgcttgaggtttgtaca
gccgccgcgcgcgcctttgagcagggcgatgccccgatcaacgcggtggaagggttcatc
cggcagattatcgggtggcgcgaatacgtgcgcggcatctattttctggaagggcccgac
tataccagccgcaacgtgctgggccagacgcgcgatttacctgacgtgtattggggcggc
aagacgggtatgaattgcatggcaaaagccgtgggccaaacccgcgaagaggcctatgcc
catcatatccagcgcttgatgatcaccgggaattttgggctgctggccgggattgatccg
caacagatgcatgagtggtatctcgcggtttacgcagatgcctttgagtgggtcgaggcc
ccgaacacggtcggcatgagccagtttgctgatggcggtatcatcgcgtccaaaccctac
gtgagcagcggcgcttatatcaatcgcatgtccgactattgcaagtcctgcagctataag
gtggcacaaaagacgggcgacacggcctgtccgttcaacttgctgtactggcattttctg
gatcgtcaccgccctcggttttcgggcaatgcgcgtatggggaacatgtatcgcacctgg
gatcggatggacgcggaaaagcgcgagaccgtgatcgccgaagcgaatgcgttattggac
cggcttgatgcgggtgaagccatttaa
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