Roseobacter litoralis: RLO149_c038250
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Entry
RLO149_c038250 CDS
T01572
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rli03110
]
RLO149_c038250 (clpB)
Chaperones and folding catalysts [BR:
rli03110
]
Heat shock proteins
HSP100
RLO149_c038250 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
TniB
IstB_IS21
AAA_7
AAA_18
AAA_25
bpMoxR
AAA_14
AAA_24
NACHT
T2SSE
HAUS2
MTR4-like_stalk
Fez1
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AEI95730
UniProt:
F7ZCW9
LinkDB
All DBs
Position
complement(3871476..3874094)
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AA seq
872 aa
AA seq
DB search
MDLNKFTERSRGFIQAAQTIAARESHQRLAAEHLLKALMDDDQGLASNLISAAGGQPAQV
LDAVDLALGKMPKVTGDAAQVYVDGTTTKVLAEAEQLAKKAGDSFVPVERILMALCMVKS
GAKTALDAGQVTAQALNGAINDVRKGRTADTATAEEGYDALKKYAMDLTDRAEAGKIDPI
IGRDEEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKKLLAL
DMGALIAGAKFRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKADGAMDAANLIK
PALARGELHCVGATTLDEYRKYVEKDAALARRFQPILVQEPTVEDTVSILRGIKEKYELH
HGVRISDSSLVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDAIDRQIL
QMQIEAEALRREDDAASLDRLETLEKELSELQERSDAMTAKWQAERDKLAGARDLKEQLD
HARAELEIAKREGNLGKAGELSYGVIPQLEKQLEAAEGRDDGDVMVEEAVRPEQIASVVE
RWTGIPAGKMLEGERDKLLRMEDQLHGRVIGQEPAVRAISNAVRRARAGLNDENRPLGSF
LFLGPTGVGKTELTKAVAEFLFDDDNAMVRIDMSEFMEKHAVSRLIGAPPGYVGYDEGGV
LTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLG
AQALSQLPDGADASGAKRDVMDAVRAHFRPEFLNRLDETIIFDRLARTDMDGIVDIQMAR
LLKRLAGRKIALELDDAARMWLADEGYDPVFGARPLKRVIQRALQDPLAEMILAGDVKDG
DVIQVSVGSEGLLIGDRIAATNRPKPDEAVVH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacttgaacaagttcacggaacggtcgcgcgggtttatccaggcggcacagacgatt
gcggcacgcgaaagccatcagagattggcagccgaacacttattgaaagcattgatggac
gatgatcaggggctggccagcaatctgatctcagctgcgggtgggcaaccagcgcaggtc
ctggatgctgttgatctcgcactgggtaaaatgcccaaggtgaccggtgatgctgcacag
gtttatgtggatggcaccacgaccaaggttctcgccgaggccgagcaactggccaaaaag
gccggtgacagttttgtccctgtcgagcgcattttgatggcgctgtgcatggtcaaatca
ggggctaaaacggccttggatgcggggcaggtgaccgcgcaggcgttgaacggtgcaatt
aacgatgtgcgcaaggggcgcacagcggataccgcaactgccgaagaaggctatgatgcg
ttgaagaaatacgcgatggacctgacagatcgggccgaggcgggcaagatcgacccgatc
atcggtcgggacgaggaaatccgccgcaccatgcaggttctgagccgccggaccaagaac
aatccggtgctgatcggggagccgggcgttggtaaaaccgcgattgccgaagggctggcc
ctgcggatcgtaaacggcgatgtgcctgaatccctgcgcaacaagaagctgctcgcgctg
gatatgggtgcattgatcgcgggagcaaagtttcgcggtgaatttgaagaacgcctcaaa
gcggtgctgaccgaagtcacggaagctgcgggcgagatcattcttttcatcgatgagatg
cacacgcttgtcggcgcgggtaaggcggatggcgcaatggatgcggccaacctgatcaaa
cctgcccttgcgcgtggtgagttgcattgtgtcggggcaaccacgcttgatgagtatcgc
aaatatgttgaaaaagacgcagcccttgcgcgtcggttccagcccattctggtgcaggag
ccaacggtcgaggacacggtgtcgatcctgcgtggtatcaaagagaaatacgagcttcac
catggtgtgcgtatctcggattcgtcgctggtcgcggcggcgacgctgagccaccgctac
atcaccgaccggttcttgcctgataaggcaatcgacctcgtggacgaagcggcatcgcgt
ttgcgcatggaagtggacagcaaacccgaagaactggacgccatcgaccgccagatcctg
cagatgcagatcgaggccgaagcgctccggcgtgaggacgatgcggcaagcttggatcgc
cttgagacgctggaaaaggaactgtccgaattgcaggagcgcagcgatgcgatgactgcg
aaatggcaggccgagcgggacaagttggcgggcgcgcgtgatctcaaggaacaacttgat
catgcccgcgcggaactggaaatcgccaagcgcgaggggaacctcggtaaagcgggcgaa
ttatcttatggagtgatcccgcaactggaaaagcagctggaggctgccgaggggcgggac
gacggcgacgtcatggtcgaagaagccgtgcgccccgagcagatcgccagtgtggttgag
cgctggaccggtatcccggcgggcaaaatgctggaaggtgaacgcgataaactgctgcgc
atggaggatcagctgcatggccgggtgatcgggcaggaacccgcggtgcgcgcaatttcc
aacgcggtgcgccgtgcgcgcgcgggtctgaatgatgagaaccggcctttgggctcgttc
ctgttccttgggccaaccggtgttggtaaaaccgaactgaccaaagcggtcgctgagttt
ctgtttgatgacgacaatgcgatggtgcgcatcgacatgtcagagttcatggaaaaacac
gcggtgtcgcgcctgatcggtgcccctcccggctatgtcgggtacgatgaaggcggcgtt
ttgaccgaagctgtgcgtcgcagaccctatcaggttgtcctgttcgatgaggtcgaaaag
gcccacccggatgttttcaacgtcctgttgcaggtgctggatgatggggttctgaccgac
ggtcagggtcgcacggtagatttcaaacagacgttgatcgtgttgacctcaaacctcggg
gcgcaggcgcttagccagctgcctgatggggccgatgcatcgggtgcaaagcgggatgtg
atggatgcggtccgcgcccatttccggccggagttcttgaaccgtctggatgagacgatc
atctttgaccgacttgcacggaccgatatggatgggatcgtcgacattcagatggcgcgt
ctgttgaaacggctggccggtcgcaagatcgcactggaactggatgacgcggcacgcatg
tggctcgcggacgaaggctacgacccggtcttcggggcgcgcccgctgaaacgtgtgatc
cagcgcgccttgcaggatccgcttgccgagatgatcttggcaggggacgtcaaagacggc
gatgtcattcaggtcagtgtcggcagcgaaggtctgttaatcggcgacaggatcgcggcg
accaacaggcccaagccggatgaagcggtcgtacactaa
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