Roseobacter litoralis: RLO149_c038920
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Entry
RLO149_c038920 CDS
T01572
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rli
Roseobacter litoralis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rli03016
]
RLO149_c038920
Enzymes [BR:
rli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RLO149_c038920
Transfer RNA biogenesis [BR:
rli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RLO149_c038920
Prokaryotic type
RLO149_c038920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEI95796
UniProt:
F7ZDL1
LinkDB
All DBs
Position
3945481..3946392
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AA seq
303 aa
AA seq
DB search
MGRRRKGRDISGWLIVDKPAGLTSTAVVNKVRWALDAKKAGHAGTLDPDATGVLAVALGE
ATKTVPYVTDALKAYEFEIRLGQATNTDDAEGEVIARSDLRPTEAEIKEALSAFIGDIEQ
VPPQFSAVKVDGERAYKRARDGEEMTLAARPLYVESLLLIDCPDADHVLLEMVCGKGGYV
RSIARDLGAALGCLAHVRSLRRVWSGPFDAENAADLETIESLARTPELDAHVQPLETALD
DMPEVKATAEGAVRLRNGNPGMVMASGIEYGETCWASFENRAIAIGRYKSGELHPVRVIN
APD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaggcgcaagggacgcgacatttccggctggctgatcgtggataaacccgca
gggctcacatcaacggcagtggtcaacaaggtccgctgggcgcttgatgccaaaaaggca
ggccatgcaggtacgctcgaccctgatgcaactggcgttctggccgtggccttgggggag
gcgacgaaaaccgtgccctatgtgacggacgcgctgaaagcctatgagtttgaaatccgt
ctgggtcaggcgaccaacaccgatgacgcagagggcgaagtgatcgcgcgcagtgacctg
cgcccgacagaggctgagatcaaggaagcgctgagcgctttcatcggggatatcgaacag
gtcccgccgcaattctctgccgtgaaggtggatggcgaacgcgcgtacaaacgtgcgcgc
gatggcgaggagatgaccctcgccgcgcggccactttatgtagaaagcctgctgctgatc
gactgccctgacgcggatcatgtgcttcttgagatggtctgcggcaagggcggctatgtg
cgttccatcgcgcgcgatcttggggctgctctgggatgtctggcgcatgtgcggtccttg
cgccgggtctggtcgggtccgtttgatgctgaaaacgcagcggatcttgagacgatcgaa
tccctcgccagaacccctgagcttgacgcgcatgtccagcctctggaaaccgcgcttgat
gatatgcccgaggtcaaggccactgcggagggggctgtgcgcctgcgcaacggcaacccc
ggcatggttatggcaagcggcattgaatacggcgaaacctgctgggcgtcgtttgagaac
cgcgcaatcgccatcgggcggtataaatccggcgaattgcacccggtacgcgtgatcaac
gccccagactga
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