Roseobacter litoralis: RLO149_c040610
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Entry
RLO149_c040610 CDS
T01572
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rli
Roseobacter litoralis
Pathway
rli00061
Fatty acid biosynthesis
rli00071
Fatty acid degradation
rli01100
Metabolic pathways
rli01212
Fatty acid metabolism
rli02024
Quorum sensing
rli04146
Peroxisome
Module
rli_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RLO149_c040610 (fadD)
00071 Fatty acid degradation
RLO149_c040610 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RLO149_c040610 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLO149_c040610 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rli01004
]
RLO149_c040610 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rli04147
]
RLO149_c040610 (fadD)
Enzymes [BR:
rli01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RLO149_c040610 (fadD)
Lipid biosynthesis proteins [BR:
rli01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RLO149_c040610 (fadD)
Exosome [BR:
rli04147
]
Exosomal proteins
Exosomal proteins of breast milk
RLO149_c040610 (fadD)
Exosomal proteins of breast cancer cells
RLO149_c040610 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CBFD_NFYB_HMF
DUF412
Motif
Other DBs
NCBI-ProteinID:
AEI95957
UniProt:
F7ZFF2
LinkDB
All DBs
Position
complement(4104633..4106354)
Genome browser
AA seq
573 aa
AA seq
DB search
MTAHERPWTAFYGVDVRPDLPEASYRTIGDLVHSVANTYGKAPAFTACMPNGMNGTLTFE
QVDQMSDAFAVYLREVAGLQQGDRVALQMPNCLSFPIAAFGILKAGCVLVNVNPLYTADE
MAKQFVDAEPHALIIVDMFADKIPQATRGHPIPNIIVTRVAEFLPTLPKWIIGLVQKHWD
KSVKPIEVPHIRLPDAIAAGRVHMQSEKIEVYAYRRNVQPDDIACLQYTGGTTGVAKGAM
LTHANLIMNMEQVMELISGVEKGKEIALTALPMYHIFAFTVNLLGFYWLGARNILIPNPR
PLASLKRAMENYKITWMSGVNTLFNGLTNEVWFTDSPPKHLKFASAGGMALQTAVEERWQ
EITGKPVVQGYGLTETSPALTFEPLGKKRSGTIGVPVPSTLVACLDDDGHEVPVGQSGEI
AAKGPQIMAGYWNKPEETAAVMKDGWFLTGDIGVMDADGYFTIVDRKKDMVVVSGFNVYP
NEIEECLATHPAIVEAAVIGVPDDATGEAVKAFIVRRDPSLSEADIRTHCKAHLTAYKIP
RRVEFRDELPKSNVGKILRKDLRATEIAHQAQE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcatgagcggccatggacggcattttatggtgtggacgtgcgtccggacctg
cccgaggcatcgtaccgaaccattggcgatctggtgcattccgtcgccaatacctatggc
aaggccccggccttcaccgcctgcatgcccaacggcatgaacggaactttgacgtttgag
caggtggaccagatgtctgacgcctttgcggtgtacctgcgcgaggtcgccgggttgcag
cagggtgatcgcgtcgcgttgcagatgcccaattgcctcagctttccaatcgcggccttt
gggatcctgaaagcggggtgtgttctggtcaatgtgaacccgctgtacacagcggacgag
atggcaaaacaattcgtggacgcagaaccccacgccctgatcatcgtggatatgttcgcc
gacaaaatcccgcaagcgacgcgcggtcatccgatcccgaatatcattgttacgcgggtc
gcggagtttttgccgaccctgccaaagtggatcatcgggctggtgcaaaagcactgggac
aaatcggtgaaacccattgaggtgccgcatattcgtcttcccgatgctattgcggcgggt
cgggtgcatatgcagtccgaaaagatcgaggtttatgcctatcggcgcaatgtgcagcct
gacgacatcgcctgcctgcaatacaccggtgggacgaccggcgtggccaagggcgcgatg
ctgacccatgccaatctgatcatgaacatggaacaggtgatggagctgatctccggcgtg
gagaagggcaaagagatcgccctgacagctttgccgatgtatcatatctttgcgttcacg
gtaaatttgctcgggttttactggctgggcgcgcgcaacatcctgatcccgaacccgcgc
ccgctggccagcctgaaacgcgcgatggagaattacaagatcacgtggatgagcggtgtg
aacaccctgttcaacggcttgacgaatgaggtctggttcacggacagcccgcccaaacat
ctgaaattcgcctctgctggcggtatggcgctgcaaacggcggtcgaagaacgctggcag
gagattaccggaaaaccagtggttcaggggtatggcctgaccgaaacatcacccgccttg
acctttgagcccttgggtaaaaagcgcagtggcaccatcggcgtgcctgtgccgtccacc
ttggtagcctgccttgatgatgacggccacgaagtccccgtcggccaatccggagagatt
gcagcgaaggggccgcagatcatggccggctattggaacaagcccgaggaaaccgcggcg
gtgatgaaagacggctggttcctgaccggcgacatcggcgtcatggatgccgatggctat
ttcactattgtggaccgcaagaaagacatggtggtggtgtccggattcaacgtctacccc
aatgagatcgaggaatgcctcgcaacccatcctgcgattgttgaggcggcggtgatcggc
gtccccgatgacgcaaccggggaggcggtcaaagcctttatcgtcagacgagaccccagc
ctgtcggaggctgacatccgcacccattgcaaggcgcatctgaccgcctataaaatcccc
agacgggtcgagtttcgcgatgaactgccgaaatccaacgtcggaaaaatcctcagaaaa
gacctgcgcgcgaccgagatcgcgcatcaggcgcaggagtaa
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