Roseobacter litoralis: RLO149_p630170
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Entry
RLO149_p630170 CDS
T01572
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rli
Roseobacter litoralis
Pathway
rli00521
Streptomycin biosynthesis
rli00523
Polyketide sugar unit biosynthesis
rli00525
Acarbose and validamycin biosynthesis
rli00541
Biosynthesis of various nucleotide sugars
rli01100
Metabolic pathways
rli01110
Biosynthesis of secondary metabolites
rli01250
Biosynthesis of nucleotide sugars
Module
rli_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RLO149_p630170 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RLO149_p630170 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RLO149_p630170 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RLO149_p630170 (rfbB)
00525 Acarbose and validamycin biosynthesis
RLO149_p630170 (rfbB)
Enzymes [BR:
rli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RLO149_p630170 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
adh_short_C2
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
AEI96536
UniProt:
F7ZMJ9
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All DBs
Position
pRLO149_63:complement(16091..17158)
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AA seq
355 aa
AA seq
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MVTGGAGFIGSAVVRQAIAQGHHVVNFDALTYAACLDNVAHVADDPCYVFEQADIRDRAA
LDRVFTTHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYHLLEAARAYWTAQGKPQGF
RFHHISTDEVFGSLGETGQFTELTPYDPRSPYSASKAASDHLVCAWGETYGLPILMTNCS
NNYGPYHFPEKLIPVVILNALRGAPIPVYGKGENVRDWLYVEDHADALLTVLQNGTVGRS
YNIGGKNEAKNIDIVRMICAILDTKRPKTTPSGDKAAEQNRLSYADQITFVTDRPGHDLR
YAIDPTRIATELGWRPSVTLSEGLERTVQWYLDNEDWWSALQNRDGVGQRLGARA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttggtgacaggtggggcggggttcattggctccgcagtggtacgacaggccatcgcacag
gggcaccatgtcgtgaacttcgatgcgctgacctatgcggcctgtctcgataatgtggcg
cacgtggcggatgacccctgctatgtctttgaacaggccgatattcgcgatcgcgcagcg
ctagaccgggtatttacgacgcataagcccgacgccgtgatgcatctggccgcggaaagc
catgtggacaggtccatcgacgggccaggcgattttatcgaaacgaacatcaccggcacc
tatcatctgctggaagccgcgcgggcctattggacagcgcagggtaaaccgcaagggttc
cgcttccatcatatctctacagatgaggtattcggttcgctgggcgagaccggacagttc
acggaactcacgccctacgacccgcgctcaccctattcggcatcaaaggccgcgagcgat
catctggtgtgcgcctggggcgagacctacgggttacccatcctcatgaccaattgctcc
aacaactacgggccttaccattttccggaaaaactaattcccgtagtgatcctgaacgcc
cttcgcggcgcaccaatccccgtctacggcaaaggcgagaacgtgcgcgactggctctat
gtggaggatcacgcagatgcgttgctgactgtgctgcaaaacggcacagtggggcgcagc
tataacattggtggcaagaacgaggcgaagaatatcgatatagttcgcatgatctgcgcc
atactagacactaaacgacccaaaaccacgccctcaggtgacaaagcggcagagcaaaat
aggctctcctatgcggatcagattacttttgttacagaccgtccaggccatgacctacgc
tatgcgatcgaccccacgcgcatcgccacggaactgggctggcggccttcggtaacgctg
tcggaagggctggagcggaccgtgcagtggtatctcgacaacgaggactggtggtctgca
ctgcagaaccgcgacggcgtgggccagcgcttaggagcgcgtgcatga
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