Rhizobium lentis: J0663_02300
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Entry
J0663_02300 CDS
T07189
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rln
Rhizobium lentis
Pathway
rln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0663_02300 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rln03019
]
J0663_02300 (recQ)
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_02300 (recQ)
Enzymes [BR:
rln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0663_02300 (recQ)
Messenger RNA biogenesis [BR:
rln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J0663_02300 (recQ)
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J0663_02300 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
HHH
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QSW94122
LinkDB
All DBs
Position
complement(450442..452307)
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AA seq
621 aa
AA seq
DB search
MPLSERDEPGFSAADALFSAGRAPLDVLKQIYGYSSFRGKQQQVVEHVVSGGDAVVLFPT
GAGKSLCFQIPALCREGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
TLSAGKLDLLYVTPERILTDGFRELIAHEKIALFAIDEAHCVSQWGHDFRPEYRELGRLG
EQYAGVPRIALTATADPHTRDDIVERLGLNDAEIFTTSFDRPNIAYEIVERDQARQQLLR
FLSGHKGNSGIVYCLSRAKVEDTAEWLNGQGIRALPYHAGMDRRLRDTNQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRR
RMIDEGNAADEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGQCGNCDTCLKPVE
TWEGTEAAIKALAAVYRTGERFGAGHVIDVLVGNVNEKTERFGHIDMPVFGAGKDIPART
WQSVYRQLLAMGLIRLDHGAYGALKLEPEARAVFKHERQVFFRKDRPASERRTKKAERSE
RKSGLSGADGTLFEALRAERMSIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLGISGV
GQSKLERYGDAFLEIILSHDR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagcgaacgcgatgaaccggggttttccgctgccgacgcgctgttttcggcc
ggccgcgcgccgctcgatgtgctgaagcagatctatggctattcctccttccgcggcaaa
caacagcaggtggtcgagcacgtcgtgtccggcggcgatgcggtggtgttgtttccgact
ggagcgggcaaatcgctgtgtttccagatcccggcgctctgccgggagggcgtcggcatc
gtcgtttcgccgctgatcgccttgatgcgcgaccaggtggaggcgatgaagcagctcggc
atcagggccgcggcgctgaattcttcgctgtcgcgcgaagagttcgtcgaggttcgccgc
acgctgtcggcgggaaagctcgaccttctctacgtgacgcccgagcggatcctgaccgac
gggttccgcgagctcatcgcccatgagaagatcgcgctgtttgcgatcgacgaggcgcat
tgcgtctcgcaatggggtcatgactttcggccggaataccgcgagctcggccgcctcggc
gagcaatatgccggtgtgcccagaatagcgctgacggcaacggccgatccgcacacgcgc
gacgatatcgtcgagcggctggggctcaacgatgccgaaatcttcaccaccagcttcgat
cgcccgaacatcgcctatgagatcgtcgagcgcgaccaggcgcgccagcagctcctgcgg
ttcctctccggccataagggcaacagcggcatcgtctattgcctgtcgcgcgccaaggtc
gaggatacggccgagtggctgaacgggcagggtatccgcgctctgccctatcatgccggc
atggaccggcggctgcgcgacaccaatcaggatgctttcctgaaagaagagaacctctgc
ctggtcgcaaccgtcgccttcggcatgggcatcgacaagccgaacgtgcgttatgtcgcc
catctcgacctgccgggttcggtggaggcctattatcaggagaccgggcgtgccggtcgt
gacggcctgccgtccgaggtctggatggcctatggcatggccgacgtcatccagcgccgc
cggatgatcgatgagggcaatgccgccgatgagattaagcgggtggagcgcgccaagctc
aacgccttgctggcgatctgcgaaaccgcctcctgccgccggcaggcgatccttgcccat
ttcggcgaggcgcatgccggccaatgcggcaattgcgacacctgcctgaagccggtcgag
acctgggagggcacggaggcggcgatcaaggcgctcgccgccgtctatcgcaccggcgaa
cggttcggcgccggccacgtcatcgacgtgctggtcggcaacgtcaacgagaagaccgag
cgtttcgggcatatcgacatgccggtcttcggcgccggcaaggatattccggcgcgcaca
tggcaatccgtctatcgccagctgctcgccatgggattaatccgcctcgatcacggagcc
tatggcgcactgaagctggagccggaggcgcgcgccgtgttcaagcacgagcggcaggtc
ttcttccgcaaggaccgcccggcgtcggagcgtcgcacgaagaaagccgagcgcagcgag
cgcaaatccggcttgtccggcgccgacggcacgctcttcgaagcgctcagggccgagcgc
atgtcgatcgcgaaatcgctcggcgtgccgccctatgtcgtctttcccgatacgaccctt
attgccttcgccacggaacggccgcgcagccgcaaggaactgctcggcatatcaggcgtc
ggccagtcgaagctcgagcgctacggcgatgccttccttgagatcattctctcgcacgac
cggtag
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