Rhizobium lentis: J0663_08720
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Entry
J0663_08720 CDS
T07189
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rln
Rhizobium lentis
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rln03032
]
J0663_08720 (gyrB)
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_08720 (gyrB)
Enzymes [BR:
rln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J0663_08720 (gyrB)
DNA replication proteins [BR:
rln03032
]
Prokaryotic type
DNA Topoisomerases
J0663_08720 (gyrB)
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J0663_08720 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QSW95292
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Position
1827030..1829465
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AA seq
811 aa
AA seq
DB search
MSDISATENGVSTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRHGKIHEMSFTHGVADAPLKVTGDAPDSTGTEVSF
MPSSETFTMTEFDYGTLEHRLRELAFLNSGVRILLADKRHSDIKQEEMRYEGGLEAFVAY
LDRAKKPLVDKPVAIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVVSYADNSGITKKEKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALNTWFEEHPSEAKILVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNAEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVARGKSVQYLKDEKALEEYLIAQGLEDAALRLGSGEVRTGQDLREVILDALR
MRALLDNLHSRYNRAVVEQAAIAGALNAELVSDSARALTLATEVAGRLDIIAEETERGWQ
GDLTSDGGLRLERMVRGVKEVVVLDMALIGSSDARHIDQLTSRLKEIYQTPPSLHRRDGD
VEISGPRALLDAIFASGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVSDATDA
DGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatatccgcgacggaaaacggcgtaagcaccgaatatggcgcagattccatc
aaggtcctgaagggcctcgatgccgtgcgcaagcgccccggcatgtatatcggcgatacc
gacgacggctccggtctgcatcacatggtctatgaagtcgtcgacaacgcgattgacgaa
gcgctggccggccatgcagacatcgtcaccgtcaccctcaatccggacggctccgtgacc
gtcaccgataacggccgcggcatcccgaccgacattcatagcggcgagggcgtatcggcc
gccgaagtcatcatgacgcagctccatgccggcggtaaattcgaccagaattcctacaag
gtctccggcggtctgcatggggtgggcgtttccgtcgtcaacgcgctttcggtctggctg
aagctgaagatccgccgccatggcaagatccatgaaatgagcttcacccatggcgtggcc
gatgctcctctgaaggtcacgggcgatgctcctgattcgaccggcacggaagtgagcttc
atgccgagcagcgaaaccttcaccatgacggagttcgattacggcacgctcgaacaccgc
ctgcgcgaactcgccttcctgaattccggcgtccgtatcctgctggccgacaagcgccat
tccgacatcaagcaggaagagatgcgctatgagggcggtctcgaagccttcgtcgcctat
ctcgaccgcgccaagaagccgctcgtcgacaagccggtcgccattcgcggcgaaaaggac
ggcatcaccgtcgaagtcgcgatgtggtggaacgacagctatcacgagaacgtgctctgc
ttcaccaacaacattccccagcgtgacggcggcacccatatggccggcttccgggcggct
ctgacgcgtcaggtggtttcctatgccgataattccggcatcaccaagaaggaaaaggtg
acgctccagggcgaggactgccgcgaaggcctgacggcggtcctgtcggtcaaggttccc
gatccgaaattttcctcgcagacgaaggacaagctcgtttcctcggaagtccgtccggtc
gtcgaaagcctcgtcaacgaagcgttgaacacctggttcgaagaacatccgagcgaagcc
aagattcttgtcggcaaggtcgtcgaggcggcagctgcgcgcgaagcggctcgcaaggcc
cgtgaactgacccgccgcaaaggtgcgctcgatatcgcctctcttcccggcaagctcgcc
gactgctccgagcgcgacccggccaaatccgaagtcttcctggtcgagggcgattccgcc
ggcggctcggccaagcagggccggtcgcgcgagaaccaggcgatcctgccgctgcgcggc
aagatcctgaacgtcgagcgcgcccgtttcgacaagatgctgtccagccaggagatcggc
acgctgatcaccgcgcttggcaccggcatcggcaaggacgagttcaacgccgaaaagctg
cgttatcacaagatcatcatcatgacggatgccgatgtcgacggcgcccatatccgcacc
ttgctgctcaccttcttcttccgccagatgccggagttgatcgagcgcggccatctctac
atcgctcagccgccgctctataaggtcgcgcgcggcaagtcggtgcagtatctgaaggac
gagaaggcgctcgaggaatatttgatcgcccagggccttgaggatgcggcgttgaggctc
ggcagcggcgaggtccgcaccggccaggatctgcgcgaagtcatcctcgatgcgttgcgc
atgcgcgctttgctcgacaatctccattcgcgttacaatcgcgccgtcgtcgaacaggcg
gcgatcgccggtgctctcaatgccgaactggtcagcgattccgcaagagccctcacgctg
gcgacagaggtggcaggccgtctcgacatcatcgccgaggagaccgaacgcggctggcag
ggcgatctgaccagtgatggcggcctgcgtctcgagcgcatggtccgtggcgtcaaggaa
gtggtcgtgctcgacatggcgctgatcggctcctccgacgcccgccacatcgaccagctg
acctcgcgcctcaaggaaatctatcagacgccgccgtcgctgcatcgccgcgacggcgac
gtcgagatttcggggccgcgcgcgctgctcgatgcgatcttcgccagcggccgcaaaggc
ctgaccatgcagcgctacaagggtctcggcgagatgaatgccgaacagctctgggaaacg
acgctcgatccgaatgtgcgctcgctgctgcaggtcaaggtcagtgacgccaccgatgcc
gatggcctcttcgcccgtctgatgggtgatgaagtcgagcctcggcgcgaattcatccag
gacaacgcgctcagcgtcgcaaacctcgatatctga
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