Rhizobium lentis: J0663_08790
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Entry
J0663_08790 CDS
T07189
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rln
Rhizobium lentis
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_08790 (addA)
Enzymes [BR:
rln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J0663_08790 (addA)
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J0663_08790 (addA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
nSTAND_NTPase5
AAA_30
NPHP3_N
DEAD
Exo5
Motif
Other DBs
NCBI-ProteinID:
QSW95304
LinkDB
All DBs
Position
complement(1840337..1843888)
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AA seq
1183 aa
AA seq
DB search
MSNETALPSDDDPGAWIGWTTIQQAIASDPERSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDADLSRRIMQIEGAAPDALKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGSALAEAFAYVLDLGDESGLENLLADIVANRNAIRRFTAAAERRGGVEAVLRERLG
LTAGDTESRIAAQYWPLPELSGGMLELYLSIADQRGGAKAQEVAYGLRLASRERNEARRA
EMLEKIFLTAKGEPKSDSQFLVKAMLAEAPQLTSAIAVARAHIVASRDRLKLMRMCGATQ
AALVLAGRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAGDFFSGESARSIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSESGQSFSSVRLPLSFRSTADVLEAVDQIFRTSDNARGLSALGEPVVHRSSRIGHP
GAVDLWEMIAPEAVVKEEDWTAPFDATPESAPAAILARRIAHAVGTLVGRETIIDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDFSEDDVFAIAGLRGDDESVWNHLKRFAADGTERFRAAVERLELF
LRQSRRLSVHDFYARVLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
DPDEPPLPAWVPVSDLTNSLTQNDAARIQMLAEEEYRRLLYVAMTRAADRLIVCGYRGVR
ANADTWHMMISTALGEGHPHVEAATFSGPDGEWPGIRWRVPRVERSFERIDRDEARDSHE
ALPEGLLRPLPPQAELPRPLSPSGAGTIVDEDEGSLFVASPLFGGKERSDRSLEKGRLIH
RMLQALPEIPPAGRADAAHRYAERAARFWPEGERRRLVDSVLKLLDEGGLQPVLGVEAQP
EVSIMGTLTLDDRRYAVSGRIDRLAVLADRVVILDYKTNRVPPVTEEAVPFAHKAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSETALGLALAGLKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgagaccgctcttccgagtgatgacgatcccggcgcctggatcggctggacc
accatccagcaggcgatcgcctccgatcccgagcgctcggcctgggtttcggccaatgcc
ggatccggcaagacgcatgtcctgacccagcgtgtcattcgtctcctgctggccggcgca
cggccttccgccattctctgcctgacctataccaaggccgcggcctccgaaatgtcgaac
cgcgtcttcgaacggctggcggactgggtggtgcttgacgacgctgatctcagccggcgg
atcatgcagatcgagggtgcggctcccgatgcgctgaaactcgccgaggcgcgccggctg
tttgcaaaggcgctggaaacgccgggcggactgaagatccagacgatccatgccttttgc
gaagcgctgctgcatcaattcccgcttgaggccaatgttgccgggcatttttcggtcctc
gacgatcgcgcggcggcggcgctgctttccgatgcgcgccgggcgctgctgacggcgacc
gcgccggaggaaggcagcgcccttgccgaggctttcgcctacgtgctcgatctcggcgac
gaatccggcctggagaacctgctcgccgacatcgtcgccaaccgtaatgccattcgccgc
ttcaccgcggcggccgagcgacggggcggcgtggaggcggttctgcgcgagaggcttggc
cttaccgcgggcgatacggagagccggatcgcggcgcaatattggccgttgccggagctt
tcgggtggaatgctggagctttatctgtccattgccgaccagaggggcggcgccaaggcg
caggaggttgcctatggtctcaggctcgccagccgggagcgcaatgaggccaggcgcgcc
gaaatgctggagaaaatctttctgacggcgaagggcgagccgaaatcggactcgcagttc
ctggtcaaggccatgctggcggaagcgccgcaattgacgagcgccatcgccgttgcccgc
gcacatatcgtcgcaagccgcgacaggttgaaactgatgcggatgtgcggcgccacgcag
gcagcgctcgtgctcgccggtcggctgaatcacgattacgaggagctgaagaaacaacgc
agccagctcgatttcgaagacctgatcacccgcaccgccgatctgctgacgaagagcggc
gtcggcccctggatccattacaaactcgatcggggtatcgatcatatcctcgtcgacgag
gcgcaggataccagcccgatccagtggagtgtcatccagtcgctcgccggggatttcttt
tccggcgagagcgcccggtcgatcgtgcgcacactctttgccgtcggcgacgagaagcag
tcgatctattcctttcaaggggcgcggcccgagcggttttccgaagaaagcgaccggacg
cggcgccgcgtctccgaaagcgggcagagcttttcttcggtgcggctgcccctctccttc
cgctcgaccgccgacgtgctcgaggccgtcgaccagatcttcaggacatcggacaatgcg
cggggcctcagcgcgctgggcgaaccggtcgtgcatcgttccagccgcatcggacatccg
ggcgccgtcgatctctgggagatgatcgcgccggaagcggtggtgaaggaagaggattgg
acggcgcccttcgatgcgacgccggaaagcgcgccggccgccattctcgcacggcggatc
gcccatgctgtcggcacgctcgtcggccgtgaaacgatcatcgacaaaggcaaagagcgg
ctgatcgaggccggcgatattctcgttctggtgcgcaaacgcgacgccttcgtcaatgcc
ttgacacgcgccctgaagcgccgcggtgacattcccgtcgccggtgccgacaggttgacg
ctgaccagccatatcgccgtgcaggacctgctggcactcggccgcttcctgcttctgccg
gaggacgatctttcgcttgccgccgtgctcaagagcccgcttttcgatttttccgaggac
gatgtctttgcaatcgccggcctgcggggcgacgacgaaagcgtctggaaccatctgaaa
agatttgcggccgacggcaccgaacgtttccgtgccgccgtcgaaaggctcgagctgttt
cttcggcagtcgaggcgcctgtcggtccatgatttctatgcgcgcgtgctgggcagccat
ggtgggcggcggcaattcctggcccgtctcggcaccgaggtcagcgatatcctcgacgaa
ttcctgaccttcactctcgaccatgagagctccggccttcccgggctgcaatccttcatc
tcaacgctggagctcgaagcgcccgaggtgaagcgtgagcaggacaaggggcgcaacgaa
gtcaggatcatgaccgtgcatgcctccaagggtcttgaagcgcccatcgtcttcctcgtc
gacggcggttcgaaggccttcacccatacgcatctgccgaagcttcgcctaatcgaaacc
gacccggacgagccgccgctgcctgcctgggttcctgtctccgacctcaccaattcgctg
acgcaaaacgatgccgcacgtatccagatgctggcggaagaggagtatcgccggctgctt
tatgtcgccatgacgcgggccgccgaccggctgatcgtctgcggctatcgtggcgtacgt
gccaatgccgacacctggcatatgatgatctccaccgcgctcggcgaaggccatccgcat
gtcgaggcagccaccttctccggccctgacggggaatggccaggcatccgatggcgcgtg
ccgcgggtggaacggagcttcgagcgtatcgaccgagacgaggcgcgcgacagccacgag
gctttaccggagggcctgttgcggccattgccgccgcaggccgagctgccccggcccctc
agcccttccggcgccgggacgatcgtcgacgaagacgaaggcagcctgttcgtagcttcg
ccgctgttcggcgggaaggagcggagcgatcgttcgctggaaaagggccggctgatccat
cgcatgctgcaggcgcttccggaaattccgcctgccggacgggccgatgccgcacaccgg
tatgccgaacgggcggcacggttctggccggagggcgaacgtcgcaggcttgtcgattcg
gttctgaaactattggacgaaggggggctgcagcccgtcctcggggtcgaggcccagccg
gaagtttcgatcatgggaaccttgacgctcgacgacagacgctatgccgtctccggccgt
atcgaccggcttgccgtccttgccgatcgcgtcgtcattctcgactacaagaccaatcgg
gtgccgccggtgacagaggaggccgtccccttcgcgcataaggcacagctcgccatctat
cgcgagatcctggcgccgctttatcccggcaagcgcatcgactgcatgctcgtctatacc
gagaacgcctctctctatacgctgagcgaaacggcgctcggtttggcgcttgcaggactc
aagacaaagtga
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