Rhizobium lentis: J0663_09230
Help
Entry
J0663_09230 CDS
T07189
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rln
Rhizobium lentis
Pathway
rln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J0663_09230 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rln03019
]
J0663_09230 (pnp)
03016 Transfer RNA biogenesis [BR:
rln03016
]
J0663_09230 (pnp)
Enzymes [BR:
rln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J0663_09230 (pnp)
Messenger RNA biogenesis [BR:
rln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J0663_09230 (pnp)
Transfer RNA biogenesis [BR:
rln03016
]
Prokaryotic type
tRNA degradation factors
J0663_09230 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QSW95379
LinkDB
All DBs
Position
complement(1939516..1941654)
Genome browser
AA seq
712 aa
AA seq
DB search
MFDTHSVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVVQH
DLENNPDILSMIATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVA
GTYDAVLMVESEAKELNEDVMLGAVMFGHKGFQPVLDAIIKLAEVAAKEPRDFQPEDYSE
LEGEMLTHFEAELREAYKITLKADRYAAVDAVKAKVKAHFLPEGVEAKYTAEEVGAIFKH
LQAKIVRWNILDTKSRIDGRDLETVRPIVAEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAKGGRAHILGEMAK
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEIGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTQDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQATGQEIANEKKKEEAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacacacagcgttgaaatcgagtgggccggccgcccgctgaagctcgaaacc
ggcaagatcgcccgtcaggccgacggcgcggttctcgccacctacggcgaaaccgtcgtt
ctcgccaccgtcgtctcggctaaggcgccgaagcccggccaggacttctttccgctgacc
gtcaactaccaggaaaagacctacgccgccggcaagattcccggcggctatttcaagcgc
gagggacgtccgagcgaaaacgagaccctcgtttcccgcctgatcgaccgcccgatccgc
ccgctcttcccggaaggctacaagaacgacacgcaggtcgtcgtcaccgtcgtacagcat
gacctcgagaacaatcccgatatcctgtcgatgatcgccacttcggcggcgctgacgctg
tccggcgttcccttcatgggcccggtcggcggcgcgcgcgtcggctacatcaacggcgag
tatgttctcaacccgcatctcgacgagatggatgaatcgagcctcgaccttgtcgtcgcc
ggcacctatgacgccgtgctgatggtcgaatccgaagccaaggaactcaacgaagacgtc
atgctcggcgccgtgatgttcggccacaagggcttccaaccggttctcgacgcgatcatc
aagctcgccgaagtcgccgccaaggagccgcgcgacttccagccggaagactattccgag
ctcgaaggcgagatgctgacgcatttcgaagccgaactgcgcgaagcctataagatcacc
ctgaaggcagaccgctacgccgccgtcgacgccgtcaaggccaaggtgaaggcccacttc
ctgccggaaggcgtcgaagccaagtatacggccgaagaagtcggcgcgatcttcaagcac
ctgcaggccaagatcgtccgctggaacattctcgacaccaagagccgcatcgacggccgc
gacctcgagacggttcgcccgatcgttgccgaagtcggcctgctgccgcgcacacacggt
tcggccctcttcacccgcggtgaaacccaggcgatcgtcgttgccacgctcggcaccggc
gaagatgagcagtatgtcgattccttgacgggcatgtacaaggaaaacttcatgctgcac
tacaacttcccgccctactcggtcggtgaaacgggccgcatgggctctccgggccgccgc
gaaatcggccacggcaaactcgcatggcgcgccattcatccgatgctgccgacggcggag
cagttcccctacacgctgcgcgtcgtttccgaaatcaccgaatccaacggctcctcgtcg
atggcgaccgtctgcggcacctcgctggcgttgatggatgccggcgttccgctggcaaag
ccggttgccggcatcgccatgggtctgatcctggaaggcgaccgcttcgccgtcctctcc
gacatcctcggtgacgaagaccacctcggcgacatggacttcaaggtcgctggtactgct
gacggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgctctgggccaggccaagggcggtcgcgcccacatcctcggcgaaatggccaag
gcgatcaccgaaagccgcggccagctcggcgagttcgcaccgcgcatcgaagtcatgaac
attccggtcgacaagatccgcgaagtcatcggctccggcggcaaggtcattcgcgaaatc
gtcgagaagaccggcgccaagatcaacatcgaggacgacggcaccgtcaagatcgcctcc
tcttccggcaaggaaatcgaagccgcccgcaagtggatccactcgattgtcgccgagcct
gaaatcggtcagatctatgaaggcacggtcgtcaagaccgccgacttcggcgccttcgtc
aacttcttcggcgcccgtgacggcctcgtccacatctcgcagctcgcttccgagcgtgtt
gccaagacgcaggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgctcggcttc
gacgagcgcggcaaggtccgcctgtcgatgaaggtggtcgaccaggccaccggccaggag
atcgcgaacgagaagaaaaaggaagaagcggccgaataa
DBGET
integrated database retrieval system
