Rhizobium lentis: J0663_09445
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Entry
J0663_09445 CDS
T07189
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rln
Rhizobium lentis
Pathway
rln03030
DNA replication
rln03410
Base excision repair
rln03420
Nucleotide excision repair
rln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J0663_09445 (polA)
03410 Base excision repair
J0663_09445 (polA)
03420 Nucleotide excision repair
J0663_09445 (polA)
03440 Homologous recombination
J0663_09445 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rln03032
]
J0663_09445 (polA)
03400 DNA repair and recombination proteins [BR:
rln03400
]
J0663_09445 (polA)
Enzymes [BR:
rln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J0663_09445 (polA)
DNA replication proteins [BR:
rln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J0663_09445 (polA)
DNA repair and recombination proteins [BR:
rln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J0663_09445 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J0663_09445 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QSW95421
LinkDB
All DBs
Position
1984486..1987485
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEATGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLDRATEIKQVKRRETILANI
DMARLSRELVRLRTDVPLDLDLDALLLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAS
AIEPAVVRIEWGDKAHGPDLDAAEPEPVAGAIPDVSGESVPVPPRAKAKAGVEGAFSPGD
LAKSRAEAFAALPFDHSAYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGF
ALAIADNTADPTGTKIRAAYVPLAHKSGVGDLLGGGLVENQIPMRDALPRLKALLEDESV
LKVAQNLKYDYLLMKRFGIETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGVTVDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMGL
PGGSKTKTGQWSTSASVLEDLAAAGIELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEAGLAERVRMLLQVHDELIFEVEDEDV
EKAMPIIVSVMENATMPALEMRVPLKVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccggattcatctttcgggcgttt
cacgcattgccgccgctgacgcgcaagtccgacggcctgccggtcggcgccgtctccggt
ttctgcaacatgctgtggaaactcttgagggatgcgcgcaataccgatgtcggggtcacc
ccgacccatctggccgttatcttcgattattccgccaagacctttcgcaaggatctttat
gacgcctacaaggcgaaccgctcagccccgccggaagagctcatcccgcaattcggcctc
ataagagaagcgacccgcgccttcaacctgccctgcatcgaaaccgagggctttgaggcc
gacgacatcatcgccacctatgcccgccaggccgaggcaacaggcgccgacgtcaccatc
gtttcctccgacaaggatctgatgcagctcgtcacaccaaacgtccacatgtatgacagc
atgaaggacaagcagatcggcattcccgacgtcgtcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggtgactccgtcgacaatgttcccggcattccc
ggcatcggcccgaaaaccgctgcccagctgcttgaggaatatggcgatctcgacacgctg
ctcgaccgtgccaccgagatcaagcaggtcaagcgccgcgagacgatccttgccaatatc
gacatggcgcggctttcgcgcgaactcgtgcggctgcgcaccgacgtgccgctcgatctc
gatctcgatgcgctgttgctggaaccgcagaacggcccgaagctgatcggcttcctgaag
acgatggaattcacgacgctgacccgacgcgtcgccgaagtctgcgattgcgatgcgagc
gccatcgaaccggcggtcgtccgcatcgaatggggtgataaagcccatggtcccgacctc
gatgcggccgagccggaacctgttgccggcgccatccccgacgtttcgggtgaatcggtg
cccgtgccgccgcgggcaaaggcgaaggccggcgtcgaaggcgccttttcgcctggcgat
cttgccaagtcgcgggccgaggcctttgcggcgctgcccttcgatcattcggcctatgta
acgatccgcgatctggccacgctcgaccgctggatcgccgatgcgcgcgacaccggcctc
gtcgctttcgataccgagaccacgtcgctggatgcgatgcaggccgagcttgtcggcttt
gcgctggcgattgccgataatacggccgacccgaccggcacgaagatccgcgccgcctac
gtgccgcttgcccacaagagcggcgtcggcgatctgctcggcggcggccttgtcgaaaac
cagatcccgatgcgcgatgcgctgccgcggctgaaggccttgctggaagacgaatcggtg
ctcaaggtcgcccagaacctgaaatacgactacctcctgatgaagcgcttcggcatcgag
accagaagtttcgatgacacgatgctgatctcttatgtgcttgacgccggcaccggcgct
cacggcatggacccgctctcggaaaaattcctcggccatacgccgatcccctacaaggac
gtggccggcagcggcaaggcgaatgtcactttcgatctggtcgatatcgaccgcgccact
cattacgccgccgaagacgccgacgtgacgctgcgcctctggctggtgctgaagccgcgg
ctggcggcggcagggctgaccagcgtctatgagcggctggagcggccgctgctgccggtg
ctggcgcgcatggaagcgcgcggcgtcaccgtcgaccggcagatcctgtcgcgtctctcc
ggcgaactggctcagggtgccgcacgcctggaagacgagatctacacattggccggcgag
cgtttcaatatcggttcgcccaagcagctcggcgatattctattcggaaagatggggctg
cccggcggcagcaagacgaaaaccgggcaatggtccacctccgcttcggtgctcgaggat
ctggccgctgccggcatcgagctgccgcgcaagatcgtcgactggcgccagctcaccaag
ctcaaatccacctataccgacgcgctgccgggctatgtccacccggagacaaagcgggtt
cacacctcctattcgctggcatcgacgaccacgggacgcctgtcctcctccgaaccgaac
ctgcagaacataccggtacgcacggcagaaggccgcaagatccgcaccgccttcatctcg
acgccgggccacaagctgatttccgccgattacagccagatcgaacttcgagtgcttgcc
cacgtggccgaaatcccgcagctgaccaaggccttcgaggatggggtcgacatccacgcc
atgacggcctcggaaatgttcggtgtgccggtcgaaggcatgccgggcgaggtgcgccgc
cgtgccaaggcaatcaatttcggcatcatctacggcatttctgccttcggcctcgccaac
cagctgtcgatcgagcgttcggaagccggtgactatatcaagaaatatttcgagcggttc
cccggcatccgcgactatatggaaagccgtaaggcgatggcgcgcgacaagggttatgtc
gaaacaatcttcggtcggcgaatcaactatccggaaatccgctcttccaatccctcggtg
cgcgccttcaacgaacgggcggcgatcaacgcgccgatccagggctcagcggccgacgtc
atccgccgggcgatgatcaagatggagccggccctcgccgaagccggccttgccgaacgt
gttcgcatgctgctgcaggtgcacgacgaactcatcttcgaagtcgaggatgaggatgtc
gaaaaggccatgccaattatcgtctcggtcatggaaaacgccaccatgccggcgctcgaa
atgcgcgtgccgctgaaggtcgatgcgcgtgccgccaccaattgggacgaggcgcattga
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