Rhizobium lentis: J0663_12410
Help
Entry
J0663_12410 CDS
T07189
Name
(GenBank) PAS domain S-box protein
Organism
rln
Rhizobium lentis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_4
PAS_9
HATPase_c_3
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QSW91929
LinkDB
All DBs
Position
complement(2577095..2580913)
Genome browser
AA seq
1272 aa
AA seq
DB search
MPAVQYPFIDIAVHARVRERFSRGEAMVLFSADLARLLWANGAGAELFGHAAVYDLLDQG
VDRTEITFRQLETAARQLTDVGDNRSLMIRVAKGFQRVQVQAAAELIRLSSGEKAILFSV
PVSARPLTSGASAAQMLQGLDDPDTHMAVIGANGEVIAASPGFASLAISGETAKTLINLA
GAHPDRLVKRPVATGRGYLPAAVGKLSDEPALNLLFAVETAIGHLDPVDAPMHDAVDAPP
QAADAPTGEESARPSERPPEAAAAATGFGEIVEAVAGIEEVEETLEAIADEREQPAEAAA
TSAEAAVAEMPPAADEGPKSDDDASQSSADEADAPAEPVDDGTIHSADGAAAVTVMAETP
AEAGGPTPVDEASELIQEEPAIATNPASDAPPAPVLAPEPGFVFRPNSRATRFVWKIDAE
GRFNEVSHEFAEAVGPHASAIIGSAFSDIAALFNLDPDGKISEALARRDTWSGKTILWPV
EGTSLVVPVDLAALPTYTRNRDFDGFRGFGVVRLSDAQEDPLALGLTLGPNGIGHDAASL
GPAAEAVTEPSGGIEAPPEAPSAEPSVAEEIKDQTPATSDPTEEQAGFEPPALVSAAEEP
RDSSDADADAGEAPAADGADEPPALRIVEAPNRRFADKVVQLHSTGAALTAAEQANFREI
AKRLEAFGAGKEEAEAPAPTGSATETAAFEESAEPETLASETFVADTGDPAPVEEVAPQE
AIFENAAEALREGDAAEEPAATAEDEATEGLEETVSQIEVLTSFIPPRVKMTDGLSAGTV
DQLPVAVLIHVGDALLHANPEFMRLTGYRSLDALREVGGIEALLQRRELEEKAAGSGTMM
LVKADDRLVPVTARLQSVRWEDANALMLALMPVEGKEDGRGENNRSEARPERMVEKVAKL
QVEVEELRSILETATDGVVVIGTEGDIRSMNRSASALFNYDEQETRGKPFVMLFAHESQK
AVLDYLNGLSGHGVASVLNDGREVIGREAAGGFVPLFMTMGRLTSSNGYCAVIRDITQWK
RTEDELRNAKGAAETANAHKTDFLARVSHEIRTPLNAIIGFSDMMAGERFGPIGHPRYIE
YANDIGRSGRHVLDIVNDLLDISKIEAGEMDLDFAAVGLNEAVSEAVALVQPQANSQRVI
IRTALSHAVPDVVADLRSIKQIALNILSNAIRFTPSGGQIVVSTSYEANGSVVLRVRDTG
IGMTRAELDHAMKPFRQVSSTQSRHRGDGTGLGLPLTKAMVDANRATFSINSAPNEGTLV
EITFPSQRVLAG
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtccagtatccgttcatcgatatcgccgtgcatgcgcgggtgcgggaacgc
ttttcacgcggcgaggcgatggtgctgttttcggccgatcttgcccgcctgctctgggca
aacggcgcaggtgcggagcttttcggtcatgcggcggtctatgacctgctcgatcagggt
gtcgatcgcaccgagatcaccttccgccagctggaaacggcggcgcgtcaactcaccgac
gtcggcgacaaccgcagcctgatgatccgcgtcgccaagggattccagcgtgtccaggtg
caggcggcggccgaactgatccggctttcatcaggcgagaaggccatactgttttccgtg
ccggtgtcggcaaggccgctcacgtcaggcgcctcggcggcccagatgctgcaggggctc
gacgatcccgacacccatatggcggtgatcggcgccaatggcgaggtcatcgcggcctcg
cccggttttgcctcgctcgccatctccggcgagaccgcaaagaccttgatcaacctcgcc
ggcgcgcaccccgatcggctggtgaagcgcccagtcgctaccggccggggttatctcccg
gccgcggtcggcaagctcagcgacgagccggcgctcaatctgctctttgccgtggagacc
gcgatcggtcatctcgacccggtcgatgcgcccatgcacgacgcagtcgatgcacccccg
caggcggctgacgcgcccacgggggaagagagcgcgcggccgtccgaacgtcccccggaa
gcggcggctgcagcaaccggcttcggcgagatcgtcgaagcggtcgcggggatcgaagag
gtcgaggagacgctggaggcgatcgccgacgagagggaacagccggccgaggcggctgcc
acatccgcagaggcggcggttgcggagatgcctccggccgcagacgaggggccgaagagc
gacgacgacgcgagccagagcagcgcggatgaggccgacgctcccgcagaacccgtcgat
gacggcacgatccattccgccgacggggcggcggcggtgacggtgatggcggaaacacct
gccgaagccggcggccccacgcccgtcgatgaggcgtcggaactcattcaggaagaaccg
gccatagcaacaaacccggcttccgacgcgccccctgccccggtgcttgcgccggaacct
ggtttcgtgttcaggccgaacagccgcgccacgcgcttcgtctggaagatcgatgcagaa
ggccggttcaacgaggtcagccacgaatttgccgaggccgttggtccgcatgcatccgcc
atcatcggctctgccttcagcgatatcgccgctctcttcaacctcgaccctgacggcaag
atttccgaggcgctcgcccgccgcgacacatggtcgggcaagacgatcctctggccggtc
gaaggcaccagcctggtcgttcccgtcgatctcgcggcactgccgacctatacccgcaac
cgcgatttcgacggcttccgcggcttcggcgtcgtcaggctttccgatgcgcaggaagat
ccgctggcactgggcctgacgctcggcccgaacggcatcggccatgatgcggcgagcctc
ggcccagcggccgaagccgtcaccgaaccgtcaggcggcattgaagccccacccgaagcg
ccctcggcggaaccgagcgtagcggaggagatcaaggaccagacgccagcgacctccgac
ccgaccgaggaacaggccggcttcgagccgcctgccttggtgagcgccgctgaagaaccg
cgcgacagctccgacgccgatgccgatgccggtgaagcgccggcggccgatggcgcagac
gagcccccggcgcttcgcatcgtcgaggcgcccaaccgccgctttgccgacaaggttgtg
cagttgcacagcaccggcgccgcattgacggccgccgaacaggcgaatttccgcgaaatc
gccaagcgtctggaagccttcggcgccggcaaggaagaagccgaagccccggcaccgacg
ggaagcgccaccgaaacggcggccttcgaggaaagcgccgaacccgaaaccttggcgagc
gaaacgttcgttgccgacacgggcgatccagctccggtcgaggaggtggcgccgcaggaa
gcaatttttgagaacgcggctgaggcgctgcgcgaaggcgacgccgctgaagagcccgcc
gccaccgccgaggacgaggcgacggaagggctcgaggagacggttagccagatcgaggtt
ctcaccagtttcatcccgccgcgcgtgaagatgaccgacgggctttcggccggaacggtc
gaccaattacccgtcgcggtgctgatccatgtcggcgatgcgttgctccatgccaatccg
gaattcatgcggctgacgggctaccgctcgctcgacgccttgcgcgaggtgggcggcatc
gaagcgctgttgcagcgccgcgaactcgaggaaaaggctgcgggttccggcacgatgatg
ctcgtcaaggccgacgacaggctggtgccggtgaccgcgcggctgcaatccgtgcgctgg
gaagacgccaatgccctgatgctggctctgatgccggtagaaggcaaggaggatggccgc
ggcgaaaacaaccggtccgaagcgcgtcccgagcggatggtcgagaaggtcgccaagctg
caggtcgaggtggaggaattgcgatcgatcctggaaacggcgacggacggcgtcgtcgtc
atcggcaccgagggcgacattcgctcgatgaacaggtcggcgagcgcgctgttcaattac
gacgagcaggagacgcgcggcaaacccttcgtcatgctgtttgcccatgagagccaaaaa
gcggtcctcgattatctcaacggcctctccggccacggtgtcgcgagcgtgctgaacgac
gggcgcgaagtgatcggccgcgaggccgccggcggcttcgtgccgctgttcatgacgatg
ggccggctgacctcctcgaacggctattgcgccgtcatccgcgatatcacccagtggaag
cgcaccgaggacgaactgcgcaacgccaagggcgcggccgaaaccgccaatgcccacaag
accgatttcctcgcccgcgtcagccacgaaatccgcacgccactcaacgccatcatcggc
ttttcagacatgatggcgggcgagcgcttcgggccgatcggccatccccgttacatcgaa
tatgccaatgatatcggccgctccggccggcacgtcctcgacatcgtcaacgatctcctc
gacatctcgaagatcgaagcgggcgagatggatctcgattttgccgccgtcggcctcaat
gaggctgtctcggaggccgtcgcgctggtccagccgcaggcaaacagccagcgcgtcatc
atccgcacggcgctctcgcatgcggtgcccgacgtcgtggccgatctgcgctcgatcaag
cagatcgcgctcaacatcctgtcgaacgcgatccgcttcaccccgtcgggcgggcagatc
gtcgtttccacctcctacgaggcaaatggcagcgtcgtgctgagggtgcgcgacaccggc
atcggcatgacgcgcgccgaactcgaccacgcgatgaagccgttccgccaggtctcatcg
acccagtcacgccatcgcggcgacggcaccgggctcggcctgcccctgaccaaggcgatg
gtggatgccaaccgggcgacattctcgatcaattcggcgccgaatgaaggcacgctcgtc
gaaatcaccttcccgtcgcaacgcgtgctcgccggctga
DBGET
integrated database retrieval system
