Rhizobium lentis: J0663_16410
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Entry
J0663_16410 CDS
T07189
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rln
Rhizobium lentis
Brite
KEGG Orthology (KO) [BR:
rln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rln03016
]
J0663_16410 (rnd)
Enzymes [BR:
rln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J0663_16410 (rnd)
Transfer RNA biogenesis [BR:
rln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J0663_16410 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
QSW92666
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All DBs
Position
complement(3421502..3422647)
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AA seq
381 aa
AA seq
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MIETTADLAAACKELAKSDFITIDTEFLRETTFWPELCLIQMASPTLEVLVDPLAKGIDL
APFFALMADTKVLKVFHAARQDIEIIFNRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSDKQLEYALADVTHLRDVYLSLKAELDREGRTSWLREEM
DILEARETYDMHPDDAWQRLKMRLRKPQELAILKFVAAWREREARARNVPRSRVLKDDAI
YEIAQQQPKDSEALGRLRTIPKGWERSAAGTAVVEAVNAALALPKAEMPHVPRQAQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDRIAADGEKADVAALHGWRRDLFGEPAL
QLIQGQIGLRFAGRKVETVSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccaccgccgatttggcggccgcctgcaaagagctggccaagtccgacttc
attaccatcgacaccgaattcctgcgtgagacgacattctggccggagctctgcctgatc
cagatggcaagcccgacactggaagtcctcgtcgacccgctggcgaagggcatcgatctc
gcccccttcttcgcgctgatggccgacacgaaggtgctgaaggtctttcatgcggcgcgc
caggatatcgaaatcatcttcaatcgcggcaacctcattccgcatccgatcttcgatacg
caggttgccgccatggtctgcggtttcggcgacagcgtctcctacgaccaactggtcagc
cgcatcaagaacgtccacatcgacaagtcatcgcgcttcaccgactggagccgccggccg
ctctccgacaaacagctggagtatgcgctggccgacgtcactcacctgcgcgacgtctac
ctgtcgctgaaggcggaactcgatcgcgaaggccgcacgtcctggctccgcgaggaaatg
gacatcctcgaggcgcgcgaaacctacgacatgcatcccgacgatgcctggcagcggttg
aagatgcgtctgcgcaagccgcaggaactggcgatcctgaaatttgtcgccgcctggcga
gagcgcgaggcgcgggcccgcaacgtgccgcggtcacgcgtgttgaaggacgatgcgatc
tatgagatcgcccagcagcagcccaaggattccgaagcgctcgggcgcttgcgcaccatt
cccaagggctgggagcgttcggcagccgggacggcagtcgtcgaagcggtcaacgcggcg
ctcgctcttccgaaggccgagatgccgcatgtgccgcgtcaggcgcaggcgcccgagggc
gcagcggccgccgtcgaactcttgaaggtcctgctgaagctgatctcggaaaaacatggc
gtggcgccgaaggtgatcgccaatagcgaggatctggacaggatcgccgccgatggcgaa
aaggccgatgtcgctgccctgcacggctggcgacgcgaccttttcggcgagccggcgctg
cagttgatccagggccagatcggcctgcgtttcgccggccggaaggttgaaaccgtcagc
ctctaa
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